Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
ATXN1P54253 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.29□□□□□ -2.04
ATXN1P54253 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
ATXN1P54253 snoU2-30.2-201ENST00000362805 70 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 Y_RNA.467-201ENST00000384297 102 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 SNORD116-22-201ENST00000384430 92 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 Y_RNA.531-201ENST00000384589 121 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 MIR577-201ENST00000385196 96 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 MIR1283-2-201ENST00000408621 87 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 RNA5SP511-201ENST00000410487 115 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 MTATP6P21-201ENST00000440681 189 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 RNU1-131P-201ENST00000458943 161 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 RPS27P21-201ENST00000486977 252 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 AC113410.1-201ENST00000505029 247 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 AC114801.3-201ENST00000510231 177 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 Pinc.1-201ENST00000616452 154 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 AC245060.5-201ENST00000610778 3293 ntBASIC2.28□□□□□ -2.04
ATXN1P54253 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
ATXN1P54253 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.28□□□□□ -2.05
ATXN1P54253 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
ATXN1P54253 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATXN1P54253 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATXN1P54253 Y_RNA.426-201ENST00000384068 113 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 SNORD61-201ENST00000384252 73 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 RNU6-616P-201ENST00000384353 107 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 MIR605-201ENST00000385078 83 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 SNORD77.3-201ENST00000391113 65 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 AL023284.1-201ENST00000403956 276 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 MIR1265-201ENST00000408444 86 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 Y_RNA.601-201ENST00000410500 113 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 RNU7-149P-201ENST00000516739 59 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 RNU6-1270P-201ENST00000517128 108 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 MIR4712-201ENST00000583750 82 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 Y_RNA.773-201ENST00000607168 90 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.27□□□□□ -2.05
ATXN1P54253 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATXN1P54253 MIR378A-201ENST00000362177 66 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 RNU1-22P-201ENST00000363334 158 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 SNORD115-27-201ENST00000364430 82 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 MIR548A2-201ENST00000384956 97 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 AL035398.1-201ENST00000430869 322 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 ATP5J2P3-201ENST00000451550 258 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 RNU7-123P-201ENST00000515911 60 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 RNU7-172P-201ENST00000517125 64 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 HSPE1P19-201ENST00000603327 295 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 AL513534.2-201ENST00000603836 250 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 AC005972.2-201ENST00000604690 348 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 U6.73-201ENST00000619194 103 ntBASIC2.26□□□□□ -2.05
ATXN1P54253 RNU6-23P-201ENST00000363283 107 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU6-1209P-201ENST00000363655 107 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU4-13P-201ENST00000364019 141 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU4-36P-201ENST00000364294 144 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU6-60P-201ENST00000364792 103 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 Y_RNA.298-201ENST00000364960 107 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU6-117P-201ENST00000365415 107 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 MIR597-201ENST00000384968 97 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 RNU6-1186P-201ENST00000410429 97 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 NDUFA4P2-201ENST00000489989 244 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 MIR5002-201ENST00000584713 97 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 MIR6845-201ENST00000613182 61 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 U1.36-201ENST00000620684 176 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 AC005336.3-201ENST00000623833 2679 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC2.25□□□□□ -2.05
ATXN1P54253 AC018630.2-201ENST00000534866 2403 ntBASIC2.25□□□□□ -2.05
ATXN1P54253 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
ATXN1P54253 RNU6-349P-201ENST00000362402 107 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 RNU6-832P-201ENST00000363319 107 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 RNA5SP493-201ENST00000364115 91 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 Y_RNA.213-201ENST00000364178 111 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 MIR562-201ENST00000384894 95 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 RNU6-938P-201ENST00000411285 103 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AL356379.1-201ENST00000414105 126 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AC104435.1-201ENST00000483483 166 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 RNU2-35P-201ENST00000516446 142 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 SCARNA16.3-201ENST00000516595 184 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 RNU7-116P-201ENST00000516940 62 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AC145423.2-201ENST00000610631 239 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AL353149.1-201ENST00000610667 244 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AC087741.2-201ENST00000619415 172 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 MIR338-201ENST00000636369 67 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 AC008163.1-202ENST00000636004 2889 ntBASIC2.24□□□□□ -2.05
ATXN1P54253 Y_RNA.360-201ENST00000365512 102 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 SNORA17.3-201ENST00000391159 129 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 AC096949.1-201ENST00000412047 152 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 RPL23AP6-201ENST00000446637 472 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 RNA5SP233-201ENST00000459153 113 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.23□□□□□ -2.05
ATXN1P54253 TRMT112P2-201ENST00000512910 132 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 Y_RNA.666-201ENST00000516187 112 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 RNA5SP200-201ENST00000516360 103 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 RNU6-113P-201ENST00000516653 101 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 AC008507.4-201ENST00000585464 127 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC2.23□□□□□ -2.05
ATXN1P54253 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
ATXN1P54253 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.22□□□□□ -2.05
ATXN1P54253 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.22□□□□□ -2.05
ATXN1P54253 RNU6-509P-201ENST00000363519 107 ntBASIC2.22□□□□□ -2.05
ATXN1P54253 Y_RNA.203-201ENST00000364106 102 ntBASIC2.22□□□□□ -2.05
ATXN1P54253 RNU6-409P-201ENST00000384114 104 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms