Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 MIR222-201ENST00000384992 110 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 snoU13.25-201ENST00000458945 104 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 RNU7-67P-201ENST00000459003 62 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 SNORA18.4-201ENST00000516440 124 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 SNORD36C-201ENST00000516733 66 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 AC022559.1-201ENST00000520905 205 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 AC019288.1-201ENST00000557918 224 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 MIR3129-201ENST00000581095 76 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 AL022345.2-201ENST00000606307 135 ntBASIC1.14□□□□□ -2.23
APOBEC1P41238 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.14□□□□□ -2.23
APOBEC1P41238 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.13□□□□□ -2.23
APOBEC1P41238 MIR103A2-201ENST00000362154 78 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 SNORA25.3-201ENST00000363205 127 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 SNORA25.8-201ENST00000364831 128 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 Y_RNA.338-201ENST00000365320 114 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 RNU6-1318P-201ENST00000365389 103 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 RNU6-1292P-201ENST00000383856 107 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 Y_RNA.494-201ENST00000384432 111 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 Y_RNA.521-201ENST00000384560 114 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 SNORD77.3-201ENST00000391113 65 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 MTND5P15-201ENST00000434246 349 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 RNU7-120P-201ENST00000459334 63 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 MIR3671-201ENST00000580455 88 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.13□□□□□ -2.23
APOBEC1P41238 AC090425.1-201ENST00000610007 140 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 AL353770.2-201ENST00000620024 78 ntBASIC1.13□□□□□ -2.23
APOBEC1P41238 RNU6-978P-201ENST00000364371 103 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 SNORA25.7-201ENST00000364375 127 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 Y_RNA.357-201ENST00000365487 109 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 SNORA24-201ENST00000384096 131 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 AL591704.2-201ENST00000421658 181 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 snoU13.16-201ENST00000459350 104 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 RPS29P24-201ENST00000486345 171 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 AC107027.2-201ENST00000512197 115 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 AC108729.3-201ENST00000513484 108 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 RNU11-2P-201ENST00000516898 142 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 RNU6-794P-201ENST00000517261 64 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 AP003716.2-201ENST00000528260 108 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 MTND1P7-201ENST00000632801 297 ntBASIC1.12□□□□□ -2.23
APOBEC1P41238 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
APOBEC1P41238 Y_RNA.440-201ENST00000384120 114 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 MIR150-201ENST00000385048 84 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
APOBEC1P41238 SNORD12-201ENST00000391002 90 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 AC005840.1-201ENST00000498412 377 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 Y_RNA.662-201ENST00000516028 97 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 SNORD79.1-201ENST00000516069 84 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 RNU7-53P-201ENST00000516705 60 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 RNU6-182P-201ENST00000516970 105 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 RNU6-958P-201ENST00000516995 106 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 AC004792.1-201ENST00000614523 137 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 AL157834.3-201ENST00000615543 103 ntBASIC1.11□□□□□ -2.23
APOBEC1P41238 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
APOBEC1P41238 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
APOBEC1P41238 Y_RNA.240-201ENST00000364469 95 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 Y_RNA.337-201ENST00000365312 102 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 Y_RNA.363-201ENST00000365529 113 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 RNA5SP127-201ENST00000411051 133 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 AL035398.1-201ENST00000430869 322 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 SEPT7P4-201ENST00000437076 306 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 RNU7-96P-201ENST00000459535 64 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.1□□□□□ -2.23
APOBEC1P41238 MIR5197-201ENST00000583721 112 ntBASIC1.1□□□□□ -2.23
APOBEC1P41238 RNU6-597P-201ENST00000365620 102 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 MIR1185-1-201ENST00000408598 86 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 RNU7-73P-201ENST00000458743 63 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 RNU7-80P-201ENST00000459562 61 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 RNU6-861P-201ENST00000516745 106 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 MIR548AO-201ENST00000579992 96 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 SEPT14P17-201ENST00000617978 177 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 AC027335.2-201ENST00000624030 375 ntBASIC1.09□□□□□ -2.23
APOBEC1P41238 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.08□□□□□ -2.24
APOBEC1P41238 Y_RNA.393-201ENST00000383936 102 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 MIR624-201ENST00000385217 97 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 MIR618-201ENST00000385287 98 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 AL392103.1-201ENST00000447000 198 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 RNU7-90P-201ENST00000459216 62 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 RNU7-21P-201ENST00000459430 62 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 RNU6-998P-201ENST00000515894 101 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 RN7SKP179-201ENST00000516126 217 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 RNU7-40P-201ENST00000516397 64 ntBASIC1.08□□□□□ -2.24
APOBEC1P41238 MIR302B-201ENST00000362188 73 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 MIR342-201ENST00000362212 99 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 Y_RNA.330-201ENST00000365230 109 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 RNU6-396P-201ENST00000365369 105 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 Y_RNA.351-201ENST00000365436 96 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 Y_RNA.454-201ENST00000384224 113 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 RNU6-239P-201ENST00000390990 99 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 SNORA75.2-201ENST00000391138 150 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 SNORA75.3-201ENST00000391231 150 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 MRPL35P3-201ENST00000421557 364 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 AC063976.4-201ENST00000421971 163 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.07□□□□□ -2.24
APOBEC1P41238 RNU2-11P-201ENST00000459191 187 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 MIR2115-201ENST00000516657 100 ntBASIC1.07□□□□□ -2.24
APOBEC1P41238 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms