Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.8□□□□□ -2.28
HMGCLP35914 AC008163.1-202ENST00000636004 2889 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 MIR377-201ENST00000362145 69 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 Y_RNA.91-201ENST00000363042 107 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 SNORA25.3-201ENST00000363205 127 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 SNORD45.3-201ENST00000363836 72 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 RNU6-1067P-201ENST00000384752 107 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGCLP35914 RNU7-73P-201ENST00000458743 63 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC0.8□□□□□ -2.28
HMGCLP35914 Y_RNA.679-201ENST00000516416 91 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 RNU6-197P-201ENST00000516680 100 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 AC036111.3-201ENST00000526389 112 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.8□□□□□ -2.28
HMGCLP35914 AC134878.1-201ENST00000619901 243 ntBASIC0.8□□□□□ -2.28
HMGCLP35914 Y_RNA.121-201ENST00000363309 113 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 SNORD114-24-201ENST00000365029 72 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 SNORD114-22-201ENST00000365423 72 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 Y_RNA.410-201ENST00000383992 113 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 Y_RNA.432-201ENST00000384087 111 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 RNU6-463P-201ENST00000384340 107 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 SNORA51.10-201ENST00000384418 136 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 MIR570-201ENST00000384917 97 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 RNU2-64P-201ENST00000411315 191 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 AL118496.2-201ENST00000448300 230 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 snoU13.16-201ENST00000459350 104 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 RNU6-693P-201ENST00000516134 107 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 SNORA18.4-201ENST00000516440 124 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC0.79□□□□□ -2.28
HMGCLP35914 MIR548AO-201ENST00000579992 96 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 AC131055.1-201ENST00000584626 316 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 MIR4653-201ENST00000585107 83 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 MIR8055-201ENST00000610739 97 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 AC108706.1-201ENST00000611053 297 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 AC106800.4-201ENST00000614905 153 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 AC243994.1-201ENST00000618627 109 ntBASIC0.79□□□□□ -2.28
HMGCLP35914 Y_RNA.269-201ENST00000364685 89 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 SNORA25.9-201ENST00000365087 128 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 Y_RNA.435-201ENST00000384095 112 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC0.78□□□□□ -2.28
HMGCLP35914 AC004941.2-201ENST00000427009 228 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 AF228730.3-201ENST00000436691 102 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 SNORD124-201ENST00000459577 104 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 RNU6-561P-201ENST00000516222 102 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 RNU4-71P-201ENST00000516258 113 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 AP003484.1-201ENST00000530974 250 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 AL162730.1-201ENST00000605734 292 ntBASIC0.78□□□□□ -2.28
HMGCLP35914 Y_RNA.23-201ENST00000362496 106 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 Y_RNA.168-201ENST00000363740 102 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 RNU6-702P-201ENST00000364982 107 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 RNU6-196P-201ENST00000384315 107 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.77□□□□□ -2.29
HMGCLP35914 MIR2115-201ENST00000516657 100 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 SNORD36C-201ENST00000516733 66 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 MIR4308-201ENST00000580634 81 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 MIR4744-201ENST00000581563 82 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 MIR3128-201ENST00000581957 66 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 AL365205.2-201ENST00000594586 68 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 7SK.10-201ENST00000621414 298 ntBASIC0.77□□□□□ -2.29
HMGCLP35914 Y_RNA.191-201ENST00000363972 113 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 RNU6-1292P-201ENST00000383856 107 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 Y_RNA.440-201ENST00000384120 114 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 Y_RNA.447-201ENST00000384184 113 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 Y_RNA.542-201ENST00000384641 111 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 MIR520E-201ENST00000384867 87 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 SNORD77.3-201ENST00000391113 65 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 SNORD111-201ENST00000408139 94 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 Y_RNA.626-201ENST00000411288 95 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 ACA64.5-201ENST00000516207 127 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 RNA5SP255-201ENST00000516370 107 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 AC004817.2-201ENST00000561794 651 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 MIR3149-201ENST00000584629 83 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 Z97988.1-201ENST00000637697 135 ntBASIC0.76□□□□□ -2.29
HMGCLP35914 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-978P-201ENST00000364371 103 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-654P-201ENST00000364373 107 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 Y_RNA.241-201ENST00000364470 117 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 SNORD113.3-201ENST00000364630 78 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-396P-201ENST00000365369 105 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 SNORA1-201ENST00000384107 130 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 SNORA27-201ENST00000384323 126 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 MIR499A-201ENST00000384903 122 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-913P-201ENST00000390913 95 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-578P-201ENST00000390980 103 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU2-70P-201ENST00000410718 179 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 AC107297.1-201ENST00000459991 176 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RPS29P24-201ENST00000486345 171 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 Y_RNA.673-201ENST00000516306 88 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 RNU6-111P-201ENST00000517179 105 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 AC013244.2-201ENST00000603396 103 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 MIR376A2-201ENST00000636782 80 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 MIR6866-201ENST00000638146 69 ntBASIC0.75□□□□□ -2.29
HMGCLP35914 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.75□□□□□ -2.29
HMGCLP35914 HSBP1P2-201ENST00000299671 229 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.7-201ENST00000362352 102 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.54-201ENST00000362766 105 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.60-201ENST00000362831 98 ntBASIC0.74□□□□□ -2.29
HMGCLP35914 Y_RNA.144-201ENST00000363521 113 ntBASIC0.74□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms