Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC112693.2-201ENST00000556538 232 ntBASIC1.26□□□□□ -2.21
HLA-DOBP13765 AC131055.1-201ENST00000584626 316 ntBASIC1.26□□□□□ -2.21
HLA-DOBP13765 AL121890.5-201ENST00000620848 304 ntBASIC1.26□□□□□ -2.21
HLA-DOBP13765 U8.1-201ENST00000362843 134 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 RNU6-1336P-201ENST00000383886 109 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 RNU6-588P-201ENST00000410281 105 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 AC008133.2-201ENST00000624540 351 ntBASIC1.25□□□□□ -2.21
HLA-DOBP13765 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.24□□□□□ -2.21
HLA-DOBP13765 RNA5SP48-201ENST00000363969 126 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 RNA5SP99-201ENST00000364020 114 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 SNORA24-201ENST00000384096 131 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
HLA-DOBP13765 MIR513C-201ENST00000401352 84 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 RNU7-96P-201ENST00000459535 64 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 RPS29P24-201ENST00000486345 171 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 DNAJC19P9-201ENST00000555084 351 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 MIR376A2-201ENST00000636782 80 ntBASIC1.24□□□□□ -2.21
HLA-DOBP13765 Y_RNA.52-201ENST00000362760 96 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 Y_RNA.215-201ENST00000364204 112 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 SNORA51.10-201ENST00000384418 136 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 Y_RNA.497-201ENST00000384447 98 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 RPS29P29-201ENST00000456396 171 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 RNU7-80P-201ENST00000459562 61 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.23□□□□□ -2.21
HLA-DOBP13765 MIR548X2-201ENST00000579776 100 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 MIR4791-201ENST00000607666 84 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 AL096861.1-201ENST00000610899 123 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 MIR6715A-201ENST00000615929 79 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 AC243994.1-201ENST00000618627 109 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 AL353997.5-201ENST00000618886 171 ntBASIC1.23□□□□□ -2.21
HLA-DOBP13765 Y_RNA.454-201ENST00000384224 113 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 Y_RNA.488-201ENST00000384403 102 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 Y_RNA.494-201ENST00000384432 111 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 Y_RNA.584-201ENST00000391090 114 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU6-998P-201ENST00000515894 101 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU7-41P-201ENST00000515917 61 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU6-947P-201ENST00000516264 106 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU7-53P-201ENST00000516705 60 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU6-1149P-201ENST00000516810 97 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RN7SKP88-201ENST00000516847 250 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 SCARNA15-202ENST00000516881 127 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 RNU6-165P-201ENST00000517170 99 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 7SK.8-201ENST00000612110 250 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 7SK.11-201ENST00000615477 250 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 7SK.13-201ENST00000622040 250 ntBASIC1.22□□□□□ -2.21
HLA-DOBP13765 Y_RNA.251-201ENST00000364551 99 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 Y_RNA.351-201ENST00000365436 96 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 RNU6-746P-201ENST00000384112 109 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 Y_RNA.506-201ENST00000384494 102 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 MIR570-201ENST00000384917 97 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.21□□□□□ -2.22
HLA-DOBP13765 AL035398.1-201ENST00000430869 322 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 MTATP6P21-201ENST00000440681 189 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 RNU7-197P-201ENST00000458836 62 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 RNU7-67P-201ENST00000459003 62 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 Y_RNA.703-201ENST00000516846 111 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 RNU7-70P-201ENST00000516941 66 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 MIR3192-201ENST00000584920 77 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 MIR4251-201ENST00000635819 61 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 MTND5P32-201ENST00000560711 1802 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.21□□□□□ -2.22
HLA-DOBP13765 ZNF209P-201ENST00000593450 2304 ntBASIC1.21□□□□□ -2.22
HLA-DOBP13765 Y_RNA.120-201ENST00000363304 110 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 MIR569-201ENST00000385228 96 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 AC108667.1-201ENST00000428618 249 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 RNU7-73P-201ENST00000458743 63 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 snoU13.16-201ENST00000459350 104 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 AL133373.1-201ENST00000497098 94 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 RNU1-92P-201ENST00000517017 135 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC1.2□□□□□ -2.22
HLA-DOBP13765 DLEU2_5.2-201ENST00000610606 84 ntBASIC1.2□□□□□ -2.22
HLA-DOBP13765 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
HLA-DOBP13765 Y_RNA.343-201ENST00000365354 112 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 SNORD18B-201ENST00000365659 72 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 RNU6-125P-201ENST00000384505 107 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.19□□□□□ -2.22
HLA-DOBP13765 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HLA-DOBP13765 SNORA25.12-201ENST00000516202 82 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 RNU6-958P-201ENST00000516995 106 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 AC068338.1-201ENST00000565567 176 ntBASIC1.19□□□□□ -2.22
HLA-DOBP13765 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
HLA-DOBP13765 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
HLA-DOBP13765 MIR302B-201ENST00000362188 73 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNY1P11-201ENST00000363759 113 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNU1-133P-201ENST00000364867 167 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 MIR548M-201ENST00000408260 86 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNU6-1054P-201ENST00000411293 104 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNU1-123P-201ENST00000458950 160 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNU2-11P-201ENST00000459191 187 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 RNA5SP236-201ENST00000516169 116 ntBASIC1.18□□□□□ -2.22
HLA-DOBP13765 MIR4524B-201ENST00000581569 115 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 191.5 ms