Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.69□□□□□ -2.14
SMAD6O43541 AC114811.1-201ENST00000507207 168 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 AL137067.1-201ENST00000615933 120 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 AC015726.2-201ENST00000620112 122 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 MIR4679-1-201ENST00000637619 75 ntBASIC1.69□□□□□ -2.14
SMAD6O43541 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SMAD6O43541 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SMAD6O43541 MIRLET7C-201ENST00000362160 84 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 RNU6-240P-201ENST00000516098 97 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 AC024614.2-201ENST00000577584 372 ntBASIC1.68□□□□□ -2.14
SMAD6O43541 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
SMAD6O43541 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 Y_RNA.440-201ENST00000384120 114 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 RNU6-163P-201ENST00000384396 106 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.67□□□□□ -2.14
SMAD6O43541 HMGN2P32-201ENST00000444648 269 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 RPS26P48-201ENST00000491713 339 ntBASIC1.67□□□□□ -2.14
SMAD6O43541 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.67□□□□□ -2.14
SMAD6O43541 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SMAD6O43541 SNORA4.2-201ENST00000365313 147 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNA5SP136-201ENST00000410906 107 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNVU1-2-201ENST00000516326 135 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNA5SP170-201ENST00000517150 101 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 AP003484.1-201ENST00000530974 250 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 SNORA28-201ENST00000606769 126 ntBASIC1.66□□□□□ -2.14
SMAD6O43541 RNU6-349P-201ENST00000362402 107 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 Y_RNA.43-201ENST00000362670 111 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNU6-1255P-201ENST00000363434 112 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 Y_RNA.140-201ENST00000363474 103 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNU6-690P-201ENST00000365242 106 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 U8.16-201ENST00000391279 133 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 RNA5SP89-201ENST00000410300 108 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 AC108667.1-201ENST00000428618 249 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.65□□□□□ -2.15
SMAD6O43541 SNORA18.7-201ENST00000516910 131 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 MIR4303-201ENST00000581299 66 ntBASIC1.65□□□□□ -2.15
SMAD6O43541 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.65□□□□□ -2.15
SMAD6O43541 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.64□□□□□ -2.15
SMAD6O43541 SNORA63D-201ENST00000364359 132 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 SNORD38C-201ENST00000384381 69 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 MIR570-201ENST00000384917 97 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
SMAD6O43541 RN7SKP200-201ENST00000410564 320 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC069257.2-201ENST00000441819 155 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC087499.4-201ENST00000448505 178 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 COX6CP6-201ENST00000490840 228 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 RNU7-70P-201ENST00000516941 66 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC007012.1-201ENST00000567192 175 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 MIR4679-2-201ENST00000578358 77 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 uc_338.28-201ENST00000612082 187 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC027279.3-201ENST00000625055 122 ntBASIC1.64□□□□□ -2.15
SMAD6O43541 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.64□□□□□ -2.15
SMAD6O43541 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
SMAD6O43541 MIR450A1-201ENST00000362262 91 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNU1-133P-201ENST00000364867 167 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.351-201ENST00000365436 96 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.549-201ENST00000384657 102 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 AL034345.1-201ENST00000407768 123 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNA5SP501-201ENST00000410990 112 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNA5SP168-201ENST00000516642 112 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 RNY4P20-201ENST00000516678 93 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 AL596211.1-201ENST00000569873 2277 ntBASIC1.63□□□□□ -2.15
SMAD6O43541 Y_RNA.116-201ENST00000363292 103 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 Y_RNA.281-201ENST00000364774 94 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNY1P6-201ENST00000384193 109 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-424P-201ENST00000384367 105 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 Y_RNA.494-201ENST00000384432 111 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-997P-201ENST00000384725 107 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU6-1031P-201ENST00000384773 107 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SNORD12C-201ENST00000386307 89 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SNORA48.1-201ENST00000390879 135 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC015922.2-201ENST00000435593 184 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AL603825.1-201ENST00000438481 80 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNU1-98P-201ENST00000458992 160 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 RNA5SP437-201ENST00000517249 129 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SUB1P4-201ENST00000566062 339 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 HSPE1P19-201ENST00000603327 295 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AP000942.3-201ENST00000603702 160 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC021443.1-201ENST00000604478 211 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AC091932.4-201ENST00000623386 200 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 AL442644.1-201ENST00000454390 3105 ntBASIC1.62□□□□□ -2.15
SMAD6O43541 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
SMAD6O43541 MIR342-201ENST00000362212 99 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 MIR424-201ENST00000362227 98 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-661P-201ENST00000362409 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 Y_RNA.241-201ENST00000364470 117 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-106P-201ENST00000384405 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 MT-TI-201ENST00000387365 69 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
SMAD6O43541 U8.17-201ENST00000391292 132 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 SNX2P2-201ENST00000424553 323 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU7-12P-201ENST00000516030 62 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-168P-201ENST00000516189 101 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU6-830P-201ENST00000516353 107 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 RNU7-181P-201ENST00000517234 74 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 SUMO2P16-201ENST00000519475 264 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 AL645939.4-201ENST00000604495 135 ntBASIC1.61□□□□□ -2.15
SMAD6O43541 AL035470.1-201ENST00000622571 220 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 208.9 ms