Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC243994.1-201ENST00000618627 109 ntBASIC1.36□□□□□ -2.19
TCRBV7S3A2A0A539 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
TCRBV7S3A2A0A539 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.36□□□□□ -2.19
TCRBV7S3A2A0A539 AC021753.1-201ENST00000635724 168 ntBASIC1.36□□□□□ -2.19
TCRBV7S3A2A0A539 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 RNU1-17P-201ENST00000363022 152 ntBASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 RNU6-818P-201ENST00000364837 108 ntBASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 SNORD116-18-201ENST00000383961 92 ntBASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 RNU6-588P-201ENST00000410281 105 ntBASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 RNU7-96P-201ENST00000459535 64 ntBASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
TCRBV7S3A2A0A539 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 Y_RNA.170-201ENST00000363746 110 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 Y_RNA.251-201ENST00000364551 99 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU6-1062P-201ENST00000383908 107 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 SNORA51.10-201ENST00000384418 136 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 Y_RNA.497-201ENST00000384447 98 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 MIR570-201ENST00000384917 97 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 MIR764-201ENST00000390811 85 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 SNORD37.2-201ENST00000391075 66 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU7-73P-201ENST00000458743 63 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU1-123P-201ENST00000458950 160 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU7-80P-201ENST00000459562 61 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 AC004223.1-201ENST00000479840 271 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU6-998P-201ENST00000515894 101 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 RNU6-255P-201ENST00000516957 105 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 MTND5P41-201ENST00000517498 206 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 DNAJC19P9-201ENST00000555084 351 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 MIR4251-201ENST00000635819 61 ntBASIC1.34□□□□□ -2.19
TCRBV7S3A2A0A539 Y_RNA.8-201ENST00000362353 102 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-151P-201ENST00000364158 107 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 RNU4-11P-201ENST00000365287 132 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 RNY1P5-201ENST00000383890 115 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.400-201ENST00000383963 111 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 SNORA67.5-201ENST00000391036 107 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 snoU13.16-201ENST00000459350 104 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 RNU7-200P-201ENST00000516105 62 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-947P-201ENST00000516264 106 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 AC112693.2-201ENST00000556538 232 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 PRELID3BP2-201ENST00000605362 201 ntBASIC1.33□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.52-201ENST00000362760 96 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.351-201ENST00000365436 96 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.454-201ENST00000384224 113 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 AL035398.1-201ENST00000430869 322 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 AC245047.7-201ENST00000440265 293 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 RNU7-197P-201ENST00000458836 62 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 RNU7-67P-201ENST00000459003 62 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 SNORA31.4-201ENST00000516049 129 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 RNU7-53P-201ENST00000516705 60 ntBASIC1.32□□□□□ -2.2
TCRBV7S3A2A0A539 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 RNA5SP236-201ENST00000516169 116 ntBASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-1149P-201ENST00000516810 97 ntBASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-548P-201ENST00000517083 115 ntBASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 MIR8065-201ENST00000620577 100 ntBASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 MTND5P32-201ENST00000560711 1802 ntBASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.31□□□□□ -2.2
TCRBV7S3A2A0A539 RNY1P11-201ENST00000363759 113 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.506-201ENST00000384494 102 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.584-201ENST00000391090 114 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 AC009474.2-201ENST00000451383 136 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 AC048334.1-201ENST00000477975 159 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-958P-201ENST00000516995 106 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 AP001485.1-201ENST00000604799 199 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 AC091932.4-201ENST00000623386 200 ntBASIC1.3□□□□□ -2.2
TCRBV7S3A2A0A539 ZNF209P-201ENST00000593450 2304 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 RNA5SP264-201ENST00000363115 107 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.120-201ENST00000363304 110 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 Y_RNA.215-201ENST00000364204 112 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 MIR1302-7-201ENST00000408841 72 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 AL591806.2-201ENST00000433122 173 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 AL392103.1-201ENST00000447000 198 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 RNU2-11P-201ENST00000459191 187 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 RNU11-2P-201ENST00000516898 142 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 MIR548X2-201ENST00000579776 100 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 MIR548AO-201ENST00000579992 96 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 MIR8055-201ENST00000610739 97 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 MIR7843-201ENST00000622274 79 ntBASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.29□□□□□ -2.2
TCRBV7S3A2A0A539 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 SNORD26-201ENST00000384147 75 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 RNU6-913P-201ENST00000390913 95 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 MIR513C-201ENST00000401352 84 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 RNU2-60P-201ENST00000517290 128 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 MIR3660-201ENST00000584845 100 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 AP000942.3-201ENST00000603702 160 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.28□□□□□ -2.2
TCRBV7S3A2A0A539 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 MIR569-201ENST00000385228 96 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 SNORA40.6-201ENST00000391153 128 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 MIR1185-1-201ENST00000408598 86 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 RNU4-62P-201ENST00000410125 130 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 RNU6-970P-201ENST00000516312 107 ntBASIC1.27□□□□□ -2.21
TCRBV7S3A2A0A539 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 175.2 ms