Protein–RNA interactions for Protein: Q9Y5I1

PCDHA11, Protocadherin alpha-11, humanhuman

Predictions only

Length 949 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11Q9Y5I1 AC068339.1-201ENST00000526965 141 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 MIR5009-201ENST00000578736 100 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 AC078899.2-201ENST00000595282 212 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 AP000942.3-201ENST00000603702 160 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 MIR219B-201ENST00000637023 88 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 ICE2P2-201ENST00000483823 2787 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 AC007336.1-201ENST00000576365 3828 ntBASIC2.5□□□□□ -2.01
PCDHA11Q9Y5I1 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 Y_RNA.344-201ENST00000365381 112 ntBASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-1104P-201ENST00000384723 104 ntBASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 MIR548D2-201ENST00000384955 97 ntBASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 RNU11-3P-201ENST00000391111 133 ntBASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 MIR3163-201ENST00000581592 73 ntBASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.49□□□□□ -2.01
PCDHA11Q9Y5I1 Y_RNA.140-201ENST00000363474 103 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA27-201ENST00000384323 126 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA51.10-201ENST00000384418 136 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 Y_RNA.544-201ENST00000384650 113 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA26.9-201ENST00000391322 122 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 MIR1283-2-201ENST00000408621 87 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 RN7SKP200-201ENST00000410564 320 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 HSPE1P9-201ENST00000440046 311 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 RNU2-35P-201ENST00000516446 142 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 AC022523.2-201ENST00000561045 150 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 MIR5094-201ENST00000578766 85 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 AL137847.3-201ENST00000611521 109 ntBASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
PCDHA11Q9Y5I1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 MIR21-201ENST00000362134 72 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 Y_RNA.226-201ENST00000364337 114 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 Y_RNA.241-201ENST00000364470 117 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 MIR1302-4-201ENST00000408701 150 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 SNX2P2-201ENST00000424553 323 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 AC015922.2-201ENST00000435593 184 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-998P-201ENST00000515894 101 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 SNORA40.13-201ENST00000516379 120 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 RNU6-295P-201ENST00000516901 104 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 HSPE1P19-201ENST00000603327 295 ntBASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
PCDHA11Q9Y5I1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
PCDHA11Q9Y5I1 SNORD115-34-201ENST00000362441 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-12-201ENST00000362583 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-29-201ENST00000362834 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-9-201ENST00000362912 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-21-201ENST00000362963 81 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-14-201ENST00000363090 81 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-13-201ENST00000363358 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-833P-201ENST00000363486 107 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-41-201ENST00000363608 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-11-201ENST00000363616 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-5-201ENST00000363633 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-39-201ENST00000363694 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-4-201ENST00000363810 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-16-201ENST00000363887 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-6-201ENST00000363942 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA3A-201ENST00000364113 130 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-42-201ENST00000364273 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA63D-201ENST00000364359 132 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNU4-16P-201ENST00000364737 141 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-15-201ENST00000364809 81 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-1-201ENST00000364961 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-26-201ENST00000365067 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-10-201ENST00000365073 81 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-43-201ENST00000365503 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-36-201ENST00000365629 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-424P-201ENST00000384367 105 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNU6-950P-201ENST00000384651 107 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 U8.13-201ENST00000390842 128 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 U8.16-201ENST00000391279 133 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 AL034345.1-201ENST00000407768 123 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SUMO1P4-201ENST00000429430 302 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 AL035398.1-201ENST00000430869 322 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNU7-96P-201ENST00000459535 64 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 RNA5SP402-201ENST00000517148 110 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 MIR4446-201ENST00000578505 67 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 SNORD115-40-201ENST00000606510 82 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 AC067747.1-201ENST00000608026 250 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 AC245884.12-201ENST00000615364 59 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 MIR7111-201ENST00000619751 72 ntBASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
PCDHA11Q9Y5I1 MIR342-201ENST00000362212 99 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 Y_RNA.78-201ENST00000362970 110 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 MIR597-201ENST00000384968 97 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA31.25-201ENST00000517242 134 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 AC090821.2-201ENST00000523552 176 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 Y_RNA.818-201ENST00000618813 71 ntBASIC2.45□□□□□ -2.02
PCDHA11Q9Y5I1 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 SNORA67.3-201ENST00000384366 140 ntBASIC2.44□□□□□ -2.02
PCDHA11Q9Y5I1 MIR590-201ENST00000385008 97 ntBASIC2.44□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 166.9 ms