Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SNORD115-4-201ENST00000363810 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-16-201ENST00000363887 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-6-201ENST00000363942 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-42-201ENST00000364273 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-15-201ENST00000364809 81 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-1-201ENST00000364961 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-26-201ENST00000365067 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-10-201ENST00000365073 81 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-43-201ENST00000365503 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.370-201ENST00000365589 108 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-36-201ENST00000365629 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-1189P-201ENST00000383958 107 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA70.7-201ENST00000384159 133 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR548A2-201ENST00000384956 97 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA75.5-201ENST00000391291 81 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 RNA5SP127-201ENST00000411051 133 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU5E-9P-201ENST00000411164 104 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 AC074198.2-201ENST00000508153 258 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-902P-201ENST00000517212 91 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 AC007751.1-201ENST00000529260 376 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-40-201ENST00000606510 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 AL121890.5-201ENST00000620848 304 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR520C-201ENST00000385005 87 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR624-201ENST00000385217 97 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 AC108667.1-201ENST00000428618 249 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORA25.15-201ENST00000516487 89 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU6-922P-201ENST00000516753 99 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 AP003484.1-201ENST00000530974 250 ntBASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.77□□□□□ -2.13
PCDHGA3Q9Y5H0 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR9-3-201ENST00000385084 90 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORD37.2-201ENST00000391075 66 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 AF228730.3-201ENST00000436691 102 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU6-1212P-201ENST00000517023 104 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 AC019176.1-201ENST00000518519 225 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 AC084768.2-201ENST00000622736 221 ntBASIC1.76□□□□□ -2.13
PCDHGA3Q9Y5H0 Y_RNA.241-201ENST00000364470 117 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 RNA5SP190-201ENST00000365222 118 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 Y_RNA.537-201ENST00000384626 109 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU6-768P-201ENST00000384683 107 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 AC108729.3-201ENST00000513484 108 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 AC024614.2-201ENST00000577584 372 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR3144-201ENST00000579460 79 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR4764-201ENST00000580680 88 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR3129-201ENST00000581095 76 ntBASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.75□□□□□ -2.13
PCDHGA3Q9Y5H0 Y_RNA.4-201ENST00000362333 112 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORA1-201ENST00000384107 130 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORD41-201ENST00000386967 70 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORD77.3-201ENST00000391113 65 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORA17.3-201ENST00000391159 129 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 AC003989.2-201ENST00000440224 169 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR3664-201ENST00000579074 99 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR4285-201ENST00000581001 85 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR548AR-201ENST00000582191 57 ntBASIC1.74□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU6-818P-201ENST00000364837 108 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORA67.5-201ENST00000391036 107 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU7-80P-201ENST00000459562 61 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU6-1053P-201ENST00000515930 101 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 RNU7-181P-201ENST00000517234 74 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 AL512310.8-201ENST00000550183 120 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 snoU13.31-201ENST00000607291 104 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 AC104465.1-201ENST00000611365 139 ntBASIC1.73□□□□□ -2.13
PCDHGA3Q9Y5H0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 Y_RNA.454-201ENST00000384224 113 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORA27-201ENST00000384323 126 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 MT-TR-201ENST00000387439 65 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORD13-201ENST00000459299 104 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 SNORD111.1-201ENST00000516421 86 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR5197-201ENST00000583721 112 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 Y_RNA.778-201ENST00000620203 90 ntBASIC1.72□□□□□ -2.13
PCDHGA3Q9Y5H0 MIR378A-201ENST00000362177 66 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 RNA5SP48-201ENST00000363969 126 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 RNA5SP363-201ENST00000365072 115 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU7-96P-201ENST00000459535 64 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 RPS26P48-201ENST00000491713 339 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU7-70P-201ENST00000516941 66 ntBASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
PCDHGA3Q9Y5H0 AP000648.3-201ENST00000623539 4507 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORD48-201ENST00000364953 64 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORD116-18-201ENST00000383961 92 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-938P-201ENST00000411285 103 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 RPS29P11-201ENST00000496507 171 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU7-53P-201ENST00000516705 60 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 AC131055.1-201ENST00000584626 316 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 AC008133.2-201ENST00000624540 351 ntBASIC1.7□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-151P-201ENST00000364158 107 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-1062P-201ENST00000383908 107 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 Y_RNA.440-201ENST00000384120 114 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 RNU6-804P-201ENST00000384286 107 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 SNORA51.10-201ENST00000384418 136 ntBASIC1.69□□□□□ -2.14
PCDHGA3Q9Y5H0 MIR513C-201ENST00000401352 84 ntBASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 241.1 ms