Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 Y_RNA.224-201ENST00000364308 111 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.226-201ENST00000364337 114 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.376-201ENST00000365638 108 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.587-201ENST00000391210 103 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 MTCYBP6-201ENST00000441810 138 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 AL731563.1-201ENST00000442202 214 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 snoU13.16-201ENST00000459350 104 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 SERF1AP1-201ENST00000514575 187 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-1223P-201ENST00000517124 104 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 AC012433.1-201ENST00000588916 398 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.802-201ENST00000614892 130 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 uc_338.17-201ENST00000619633 179 ntBASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.51□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-369P-201ENST00000362515 102 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-797P-201ENST00000363101 109 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.202-201ENST00000364083 110 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.293-201ENST00000364908 93 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 SNORD24-201ENST00000383884 75 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.486-201ENST00000384398 107 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.494-201ENST00000384432 111 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-125P-201ENST00000384505 107 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 MIR1287-201ENST00000408492 90 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.604-201ENST00000410574 102 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-938P-201ENST00000411285 103 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 AC087499.4-201ENST00000448505 178 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-126P-201ENST00000516685 103 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-1137P-201ENST00000517073 99 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 MIR4264-201ENST00000583520 66 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
TRAPPC4Q9Y296 SNORD115-28-201ENST00000363931 81 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.241-201ENST00000364470 117 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 MIR548A2-201ENST00000384956 97 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 MIR518F-201ENST00000384973 87 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 SNORD105-201ENST00000386910 85 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-1203P-201ENST00000410703 110 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AC090844.1-201ENST00000422019 156 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AC244098.3-201ENST00000424803 96 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AL157398.1-201ENST00000452981 186 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AC107297.1-201ENST00000459991 176 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-1338P-201ENST00000516328 91 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AP000753.3-201ENST00000604083 169 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 AP000942.4-201ENST00000604811 241 ntBASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC0.49□□□□□ -2.33
TRAPPC4Q9Y296 SNORD18A-201ENST00000363753 72 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.275-201ENST00000364726 110 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 SNORA33.2-201ENST00000365413 134 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-211P-201ENST00000384047 107 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-985P-201ENST00000410182 104 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 AC092628.1-201ENST00000436250 252 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 MTND5P22-201ENST00000458380 195 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 RNU7-73P-201ENST00000458743 63 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 RNA5SP220-201ENST00000516298 104 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 AL356055.1-201ENST00000602528 446 ntBASIC0.48□□□□□ -2.33
TRAPPC4Q9Y296 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 MIR1-1-201ENST00000362147 71 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 RNA5SP347-201ENST00000362445 119 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.37-201ENST00000362606 108 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-888P-201ENST00000363010 101 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 Y_RNA.229-201ENST00000364347 113 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 RNU4-10P-201ENST00000364383 140 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 SNORD61-201ENST00000384252 73 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 SNORA8.3-201ENST00000384679 139 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 MIR626-201ENST00000385032 94 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 SNORA40.5-201ENST00000391061 128 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 RNU1-119P-201ENST00000391122 165 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC244023.1-201ENST00000426884 112 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 snoU13.21-201ENST00000459368 105 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 SNORA18.4-201ENST00000516440 124 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC100767.1-201ENST00000528178 123 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC006006.1-201ENST00000603082 144 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AL078603.1-201ENST00000603824 313 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC242498.1-201ENST00000604134 111 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 AC134878.1-201ENST00000619901 243 ntBASIC0.47□□□□□ -2.33
TRAPPC4Q9Y296 RNU6-1289P-201ENST00000384431 106 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-205P-201ENST00000390858 107 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-693P-201ENST00000516134 107 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 RNA5SP121-201ENST00000516537 101 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.701-201ENST00000516812 110 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 RMST_2.1-201ENST00000617263 136 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 Z97988.1-201ENST00000637697 135 ntBASIC0.46□□□□□ -2.34
TRAPPC4Q9Y296 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.24-201ENST00000362508 103 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.66-201ENST00000362862 102 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-639P-201ENST00000384074 107 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 Y_RNA.572-201ENST00000384757 98 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 RNU6-913P-201ENST00000390913 95 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 RNU2-55P-201ENST00000411146 174 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 AC113618.1-201ENST00000416747 285 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 SNORD2.1-201ENST00000458762 69 ntBASIC0.45□□□□□ -2.34
TRAPPC4Q9Y296 RNU7-67P-201ENST00000459003 62 ntBASIC0.45□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 176.5 ms