Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AC019176.1-201ENST00000518519 225 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 AC007751.1-201ENST00000529260 376 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 MIR3937-201ENST00000580135 106 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 MIR8070-201ENST00000616510 88 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 U2.22-201ENST00000636441 106 ntBASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.5□□□□□ -2.17
DDX43Q9NXZ2 SNORA7.1-201ENST00000363750 139 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1336P-201ENST00000383886 109 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.488-201ENST00000384403 102 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1065P-201ENST00000384513 106 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RNA5SP482-201ENST00000391269 118 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RPS27P16-201ENST00000425758 201 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RNU7-28P-201ENST00000516759 62 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 RNU2-56P-201ENST00000516826 190 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 MIR4662B-201ENST00000579498 81 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 MIR548X2-201ENST00000579776 100 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 AC087685.1-201ENST00000587507 141 ntBASIC1.49□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.586-201ENST00000391146 98 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 RNU6-257P-201ENST00000410238 98 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 RNU6-588P-201ENST00000410281 105 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 TMSB4XP3-201ENST00000445144 114 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AC099513.1-201ENST00000490423 301 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AC112693.2-201ENST00000556538 232 ntBASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.48□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 SNORD68-201ENST00000363214 84 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 SNORA25.9-201ENST00000365087 128 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 SNORD61-201ENST00000384252 73 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 MIR513A1-201ENST00000385138 129 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 SNORA75.5-201ENST00000391291 81 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 RNU2-70P-201ENST00000410718 179 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 STAG3L5P-204ENST00000443759 179 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AC023449.1-201ENST00000454464 154 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 Y_RNA.666-201ENST00000516187 112 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 RNU6-1116P-201ENST00000517269 99 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AL365205.2-201ENST00000594586 68 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AC006441.5-201ENST00000612680 209 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AC132825.6-201ENST00000638861 357 ntBASIC1.47□□□□□ -2.17
DDX43Q9NXZ2 AL161722.3-201ENST00000605789 2983 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 RNU6-888P-201ENST00000363010 101 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORD24-201ENST00000383884 75 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORA1-201ENST00000384107 130 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.497-201ENST00000384447 98 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.521-201ENST00000384560 114 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORA19-201ENST00000384737 128 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 MIR518F-201ENST00000384973 87 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORA79-201ENST00000408376 140 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 MLLT10P1-201ENST00000418346 262 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 CALM2P4-201ENST00000430810 426 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORA25.12-201ENST00000516202 82 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 SNORD45.4-201ENST00000516629 73 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 RNU6-126P-201ENST00000516685 103 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 RNU6-365P-201ENST00000517113 106 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 AC021506.2-201ENST00000612354 169 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 MIR6844-201ENST00000637122 62 ntBASIC1.46□□□□□ -2.18
DDX43Q9NXZ2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 AC010332.2-201ENST00000613083 1904 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RNU6-268P-201ENST00000364174 107 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.265-201ENST00000364677 108 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.327-201ENST00000365201 102 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.343-201ENST00000365354 112 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RNU6-424P-201ENST00000384367 105 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 U8.16-201ENST00000391279 133 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 SNORA26-201ENST00000391286 122 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RN7SKP200-201ENST00000410564 320 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 SNX2P2-201ENST00000424553 323 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 MTND4LP9-201ENST00000427694 174 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RPS29P23-201ENST00000458635 123 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RNA5SP61-201ENST00000516453 100 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RNU2-60P-201ENST00000517290 128 ntBASIC1.45□□□□□ -2.18
DDX43Q9NXZ2 RNU6-392P-201ENST00000364926 101 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 Y_RNA.420-201ENST00000384043 110 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 SNORD26-201ENST00000384147 75 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 SNORA20-201ENST00000384662 132 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 RNU6-460P-201ENST00000391158 108 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 RPL30P13-201ENST00000418873 348 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 AC114811.1-201ENST00000507207 168 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 RNU6-504P-201ENST00000516568 104 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC1.44□□□□□ -2.18
DDX43Q9NXZ2 AL157834.3-201ENST00000615543 103 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 184.8 ms