Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 RNU7-181P-201ENST00000517234 74 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 MIR3945-201ENST00000581853 98 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC2.63□□□□□ -1.99
TRIM56Q9BRZ2 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU4-82P-201ENST00000362443 140 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-1131P-201ENST00000364955 107 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.299-201ENST00000364973 94 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.558-201ENST00000384685 113 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 MIR9-1-201ENST00000385198 89 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-816P-201ENST00000390914 107 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-1268P-201ENST00000391214 107 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-1239P-201ENST00000391310 107 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP181-201ENST00000410246 98 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU2-11P-201ENST00000459191 187 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 snoU13.27-201ENST00000459278 104 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RPS23P4-201ENST00000487908 423 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-904P-201ENST00000516206 101 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 MIR4709-201ENST00000577272 72 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 MIR6715A-201ENST00000615929 79 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 AC010297.1-201ENST00000623948 149 ntBASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.62□□□□□ -1.99
TRIM56Q9BRZ2 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-661P-201ENST00000362409 107 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNU4-36P-201ENST00000364294 144 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.507-201ENST00000384500 99 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 MIR136-201ENST00000385207 82 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP450-201ENST00000411206 102 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNU7-34P-201ENST00000459394 64 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP282-201ENST00000516355 108 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 SCARNA16.3-201ENST00000516595 184 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNU7-53P-201ENST00000516705 60 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP437-201ENST00000517249 129 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 AC004812.1-201ENST00000540773 146 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 AC104984.5-201ENST00000586878 94 ntBASIC2.61□□□□□ -1.99
TRIM56Q9BRZ2 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 SNORA4.2-201ENST00000365313 147 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.370-201ENST00000365589 108 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.531-201ENST00000384589 121 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 RNA5SP261-201ENST00000410536 106 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 MIR3152-201ENST00000579801 74 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 AC245884.12-201ENST00000615364 59 ntBASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC2.6□□□□□ -1.99
TRIM56Q9BRZ2 MIR6073-201ENST00000352083 89 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 SNORA3A-201ENST00000364113 130 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.220-201ENST00000364244 109 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 Y_RNA.494-201ENST00000384432 111 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 MIR516B2-201ENST00000385190 85 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 SNORA19.1-201ENST00000410656 129 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-109P-201ENST00000516364 107 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 RNU6-184P-201ENST00000516514 107 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 RNU6ATAC12P-201ENST00000516542 115 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 SNORA31.15-201ENST00000516771 132 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 AC024614.2-201ENST00000577584 372 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 FAM71BP1-201ENST00000604431 523 ntBASIC2.59□□□□□ -1.99
TRIM56Q9BRZ2 AC092881.1-201ENST00000638218 2733 ntBASIC2.59□□□□□ -2
TRIM56Q9BRZ2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
TRIM56Q9BRZ2 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
TRIM56Q9BRZ2 Y_RNA.93-201ENST00000363066 109 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 SNORD115-19-201ENST00000363098 82 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 SNORD115-18-201ENST00000363293 82 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 SNORD115-17-201ENST00000364612 82 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 MIR524-201ENST00000385242 87 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 PGBD4P5-201ENST00000445958 426 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 SNORD109B-201ENST00000458961 67 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 SNORD109A-201ENST00000459128 67 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 DEFB131E-201ENST00000532329 154 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 MIR4435-1-201ENST00000582552 80 ntBASIC2.58□□□□□ -2
TRIM56Q9BRZ2 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.58□□□□□ -2
TRIM56Q9BRZ2 Y_RNA.10-201ENST00000362371 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-859P-201ENST00000362728 107 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 Y_RNA.107-201ENST00000363190 121 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 SNORD73B-201ENST00000364394 72 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-1319P-201ENST00000390855 104 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-747P-201ENST00000390928 104 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-360P-201ENST00000390944 104 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-241P-201ENST00000391148 104 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNA5SP100-201ENST00000410903 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNA5SP59-201ENST00000410922 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-177P-201ENST00000411257 104 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 POLR2J4-204ENST00000418424 324 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 AL512326.2-201ENST00000426359 151 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 MTATP8P2-201ENST00000435212 202 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU7-113P-201ENST00000459273 62 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU7-193P-201ENST00000516723 65 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU2-19P-201ENST00000517288 84 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 AC021506.2-201ENST00000612354 169 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.57□□□□□ -2
TRIM56Q9BRZ2 RNU6-49P-201ENST00000384256 107 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 MIR660-201ENST00000385235 97 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 RPS3AP1-201ENST00000413190 320 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 SUMO1P4-201ENST00000429430 302 ntBASIC2.56□□□□□ -2
TRIM56Q9BRZ2 RPS29P29-201ENST00000456396 171 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms