Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 MIR548O-201ENST00000408583 114 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 RNU6-985P-201ENST00000410182 104 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 AC113618.1-201ENST00000416747 285 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 AC005534.2-201ENST00000431047 433 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.641-201ENST00000459414 105 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 SNORA27.4-201ENST00000516650 95 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.58□□□□□ -2.32
NPAS2Q99743 MIR4724-201ENST00000579485 89 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 MIR4791-201ENST00000607666 84 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 uc_338.4-201ENST00000616635 176 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 MTND1P7-201ENST00000632801 297 ntBASIC0.58□□□□□ -2.32
NPAS2Q99743 Y_RNA.117-201ENST00000363294 101 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 Y_RNA.152-201ENST00000363578 100 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 MIR193B-201ENST00000384907 83 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 SNORD89-201ENST00000390981 114 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 AL731563.1-201ENST00000442202 214 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 AC023449.1-201ENST00000454464 154 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.57□□□□□ -2.32
NPAS2Q99743 RNU6-1338P-201ENST00000516328 91 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 RNU6-1007P-201ENST00000516586 107 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 AL136317.1-201ENST00000612653 226 ntBASIC0.57□□□□□ -2.32
NPAS2Q99743 RNU6-211P-201ENST00000384047 107 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 RNU6-639P-201ENST00000384074 107 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 Y_RNA.486-201ENST00000384398 107 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 Y_RNA.494-201ENST00000384432 111 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 SNORA2B-201ENST00000384583 137 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 SNORD99-201ENST00000408612 74 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 RNU6-1203P-201ENST00000410703 110 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 RNU6-733P-201ENST00000410759 104 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 MTND4LP30-201ENST00000454092 297 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 AC067940.1-201ENST00000458411 300 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 SERF1AP1-201ENST00000514575 187 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 AC044792.1-201ENST00000593294 196 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 7SK.10-201ENST00000621414 298 ntBASIC0.56□□□□□ -2.32
NPAS2Q99743 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
NPAS2Q99743 Y_RNA.24-201ENST00000362508 103 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 RNU6-1289P-201ENST00000384431 106 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 Y_RNA.537-201ENST00000384626 109 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 Y_RNA.587-201ENST00000391210 103 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 RNA5SP496-201ENST00000391240 109 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 SNORD111-201ENST00000408139 94 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 RNU6-994P-201ENST00000410507 111 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 MTATP8P1-201ENST00000467115 207 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 MTCO2P24-201ENST00000515611 426 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 RNU6-1143P-201ENST00000516125 104 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 SNORD77.4-201ENST00000516158 81 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 RNA5SP121-201ENST00000516537 101 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.55□□□□□ -2.32
NPAS2Q99743 AC007751.1-201ENST00000529260 376 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 MIR1273G-201ENST00000577677 100 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC0.55□□□□□ -2.32
NPAS2Q99743 AC006006.1-201ENST00000603082 144 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 AC243994.1-201ENST00000618627 109 ntBASIC0.55□□□□□ -2.32
NPAS2Q99743 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NPAS2Q99743 UBE2WP1-201ENST00000362030 340 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNA5SP347-201ENST00000362445 119 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 SNORD114-23-201ENST00000363536 72 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 Y_RNA.241-201ENST00000364470 117 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 SNORA1.2-201ENST00000365189 134 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-1138P-201ENST00000365359 106 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-1227P-201ENST00000383981 107 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-1067P-201ENST00000384752 107 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-205P-201ENST00000390858 107 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNA5SP193-201ENST00000410353 107 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-651P-201ENST00000411040 105 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU6-847P-201ENST00000411115 108 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 AL157398.1-201ENST00000452981 186 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 RNU2-13P-201ENST00000515909 113 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 MIR2115-201ENST00000516657 100 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 Y_RNA.802-201ENST00000614892 130 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 AP001282.2-201ENST00000616149 309 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 uc_338.17-201ENST00000619633 179 ntBASIC0.54□□□□□ -2.32
NPAS2Q99743 SNORD45.3-201ENST00000363836 72 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 Y_RNA.229-201ENST00000364347 113 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 Y_RNA.237-201ENST00000364439 102 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 Y_RNA.242-201ENST00000364473 110 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 SNORD113.3-201ENST00000364630 78 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 Y_RNA.275-201ENST00000364726 110 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 RNU6-396P-201ENST00000365369 105 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 Y_RNA.376-201ENST00000365638 108 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 MIR526A2-201ENST00000390198 65 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 RNU6-1109P-201ENST00000391187 107 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 RNU6-613P-201ENST00000410412 108 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 AC090844.1-201ENST00000422019 156 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 AC015818.7-201ENST00000428754 109 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 AC092628.1-201ENST00000436250 252 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 AC087499.7-201ENST00000441958 109 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 snoU13.21-201ENST00000459368 105 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 RNU4-54P-201ENST00000516428 129 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 MIR4711-201ENST00000578274 70 ntBASIC0.53□□□□□ -2.32
NPAS2Q99743 RNU6-238P-201ENST00000363313 106 ntBASIC0.52□□□□□ -2.33
NPAS2Q99743 RNU6-740P-201ENST00000364734 105 ntBASIC0.52□□□□□ -2.33
NPAS2Q99743 RNU6-125P-201ENST00000384505 107 ntBASIC0.52□□□□□ -2.33
NPAS2Q99743 MIR548A2-201ENST00000384956 97 ntBASIC0.52□□□□□ -2.33
NPAS2Q99743 MIR518F-201ENST00000384973 87 ntBASIC0.52□□□□□ -2.33
NPAS2Q99743 TRBVB-201ENST00000477100 408 ntBASIC0.52□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 249.5 ms