Protein–RNA interactions for Protein: Q3ZCT1

ZNF260, Zinc finger protein 260, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260Q3ZCT1 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
ZNF260Q3ZCT1 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-1084P-201ENST00000362498 107 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-640P-201ENST00000363693 105 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.348-201ENST00000365403 103 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-905P-201ENST00000384434 107 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNA5SP501-201ENST00000410990 112 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 STAG3L5P-204ENST00000443759 179 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 AL031737.1-201ENST00000450125 223 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 UBL5P3-201ENST00000475112 231 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNVU1-2-201ENST00000516326 135 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNU7-28P-201ENST00000516759 62 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 AP003484.1-201ENST00000530974 250 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 MIR5094-201ENST00000578766 85 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 AC078899.2-201ENST00000595282 212 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-94P-201ENST00000607728 107 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
ZNF260Q3ZCT1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-1019P-201ENST00000364424 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 SNORA16B-201ENST00000364674 135 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.298-201ENST00000364960 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.323-201ENST00000365157 109 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-32P-201ENST00000383948 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-13P-201ENST00000384248 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-12P-201ENST00000384604 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-41P-201ENST00000384741 107 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 SNORA48.1-201ENST00000390879 135 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU7-123P-201ENST00000515911 60 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU2-35P-201ENST00000516446 142 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 MIR514B-201ENST00000516774 80 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-537P-201ENST00000517277 103 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 IGKV3-31-201ENST00000523109 329 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 AC022523.2-201ENST00000561045 150 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 MIR5582-201ENST00000579697 68 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 AC015726.2-201ENST00000620112 122 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 AC091932.4-201ENST00000623386 200 ntBASIC1.73□□□□□ -2.13
ZNF260Q3ZCT1 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-766P-201ENST00000362478 107 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.163-201ENST00000363702 113 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.265-201ENST00000364677 108 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-690P-201ENST00000365242 106 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.362-201ENST00000365518 110 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-1014P-201ENST00000383940 103 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNY1P6-201ENST00000384193 109 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-424P-201ENST00000384367 105 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 U8.16-201ENST00000391279 133 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 AC087499.4-201ENST00000448505 178 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 RNU6-412P-201ENST00000516434 106 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 Y_RNA.694-201ENST00000516677 117 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 AC069114.2-201ENST00000604699 304 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 U1.36-201ENST00000620684 176 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 AC027279.3-201ENST00000625055 122 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
ZNF260Q3ZCT1 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 Y_RNA.344-201ENST00000365381 112 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 MIR504-201ENST00000385065 83 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 HMGN2P32-201ENST00000444648 269 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 RN7SL274P-201ENST00000492268 272 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 RNA5SP437-201ENST00000517249 129 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 SUMO2P16-201ENST00000519475 264 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 SUB1P4-201ENST00000566062 339 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 MIR7843-201ENST00000622274 79 ntBASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.71□□□□□ -2.14
ZNF260Q3ZCT1 RNU1-133P-201ENST00000364867 167 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 SNORA51.10-201ENST00000384418 136 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 RNU6-296P-201ENST00000384608 107 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 MIR802-201ENST00000390235 94 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AC015922.2-201ENST00000435593 184 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 snoU13.15-201ENST00000459407 104 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 RPL39P34-201ENST00000477141 156 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 RPS29P24-201ENST00000486345 171 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AC099513.1-201ENST00000490423 301 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AC021443.1-201ENST00000604478 211 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AP001318.4-201ENST00000616637 121 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AC131280.1-202ENST00000624067 4211 ntBASIC1.7□□□□□ -2.14
ZNF260Q3ZCT1 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 SNORA63.5-201ENST00000363548 123 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 Y_RNA.351-201ENST00000365436 96 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 Y_RNA.369-201ENST00000365568 117 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 RNU7-164P-201ENST00000459221 62 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 Y_RNA.677-201ENST00000516401 85 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 RNA5SP168-201ENST00000516642 112 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 MIR5089-201ENST00000580047 84 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 MIR3683-201ENST00000580847 82 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 MIR4305-201ENST00000583252 102 ntBASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.69□□□□□ -2.14
ZNF260Q3ZCT1 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.69□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 165.1 ms