Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
NKX6-1P78426 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
NKX6-1P78426 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.7□□□□□ -2.14
NKX6-1P78426 Y_RNA.241-201ENST00000364470 117 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 Y_RNA.355-201ENST00000365462 98 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 SNORD116-18-201ENST00000383961 92 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 MIR520C-201ENST00000385005 87 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 SUMO2P12-201ENST00000405924 140 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 RPL30P7-201ENST00000479312 323 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 AP003484.1-201ENST00000530974 250 ntBASIC1.7□□□□□ -2.14
NKX6-1P78426 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
NKX6-1P78426 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.7□□□□□ -2.14
NKX6-1P78426 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.7□□□□□ -2.14
NKX6-1P78426 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NKX6-1P78426 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
NKX6-1P78426 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NKX6-1P78426 RNA5SP160-201ENST00000364866 120 ntBASIC1.69□□□□□ -2.14
NKX6-1P78426 SNORA40.5-201ENST00000391061 128 ntBASIC1.69□□□□□ -2.14
NKX6-1P78426 SNORD77.3-201ENST00000391113 65 ntBASIC1.69□□□□□ -2.14
NKX6-1P78426 RPL39P39-201ENST00000455840 151 ntBASIC1.69□□□□□ -2.14
NKX6-1P78426 RNU6-1212P-201ENST00000517023 104 ntBASIC1.69□□□□□ -2.14
NKX6-1P78426 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
NKX6-1P78426 RNU6-151P-201ENST00000364158 107 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 RNU6-818P-201ENST00000364837 108 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 MIR624-201ENST00000385217 97 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 AL627390.1-201ENST00000396055 340 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 SNORA25.15-201ENST00000516487 89 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 RNU6-250P-201ENST00000516958 103 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.68□□□□□ -2.14
NKX6-1P78426 MIR4764-201ENST00000580680 88 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 MIR548AR-201ENST00000582191 57 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
NKX6-1P78426 Y_RNA.778-201ENST00000620203 90 ntBASIC1.68□□□□□ -2.14
NKX6-1P78426 SNORD115-34-201ENST00000362441 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-12-201ENST00000362583 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-29-201ENST00000362834 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-9-201ENST00000362912 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-21-201ENST00000362963 81 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-14-201ENST00000363090 81 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-13-201ENST00000363358 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-41-201ENST00000363608 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-11-201ENST00000363616 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-5-201ENST00000363633 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-39-201ENST00000363694 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-4-201ENST00000363810 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-16-201ENST00000363887 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-6-201ENST00000363942 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-42-201ENST00000364273 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-15-201ENST00000364809 81 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-1-201ENST00000364961 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-26-201ENST00000365067 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-10-201ENST00000365073 81 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-43-201ENST00000365503 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-36-201ENST00000365629 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 Y_RNA.398-201ENST00000383952 99 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORA70.7-201ENST00000384159 133 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD41-201ENST00000386967 70 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SNORD115-40-201ENST00000606510 82 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 AL121890.5-201ENST00000620848 304 ntBASIC1.67□□□□□ -2.14
NKX6-1P78426 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.67□□□□□ -2.14
NKX6-1P78426 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.67□□□□□ -2.14
NKX6-1P78426 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
NKX6-1P78426 RNA5SP190-201ENST00000365222 118 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 RNU6-1130P-201ENST00000365434 107 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 RNU6-1062P-201ENST00000383908 107 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 SNORA17.3-201ENST00000391159 129 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 MIR513C-201ENST00000401352 84 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 RNU6-947P-201ENST00000516264 106 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 SNORD111.1-201ENST00000516421 86 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 SNORD36C-201ENST00000516733 66 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 RNU6-902P-201ENST00000517212 91 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.66□□□□□ -2.14
NKX6-1P78426 AC021753.1-201ENST00000635724 168 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 MIR3658-201ENST00000636291 56 ntBASIC1.66□□□□□ -2.14
NKX6-1P78426 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
NKX6-1P78426 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.65□□□□□ -2.15
NKX6-1P78426 RNU4-11P-201ENST00000365287 132 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 SNORA27-201ENST00000384323 126 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 RNU6-588P-201ENST00000410281 105 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 RNU6-321P-201ENST00000410912 106 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 BTF3P4-201ENST00000418852 495 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 RNU7-70P-201ENST00000516941 66 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 AC112693.2-201ENST00000556538 232 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 MIR5197-201ENST00000583721 112 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 SNRPGP19-201ENST00000603826 189 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.65□□□□□ -2.15
NKX6-1P78426 RNY1P10-201ENST00000363268 113 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 RNU6-1082P-201ENST00000364574 107 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 Y_RNA.400-201ENST00000383963 111 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 Y_RNA.537-201ENST00000384626 109 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 MIR489-201ENST00000384923 84 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 SNORD28B-201ENST00000390993 75 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 RNU6-938P-201ENST00000411285 103 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.64□□□□□ -2.15
NKX6-1P78426 SNORD13-201ENST00000459299 104 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 RPS26P48-201ENST00000491713 339 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
NKX6-1P78426 AC090821.2-201ENST00000523552 176 ntBASIC1.64□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 163.5 ms