Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 RNA5SP285-201ENST00000516619 119 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 RNA5SP480-201ENST00000516840 109 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 MIR1244-1-201ENST00000612829 85 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 MIR1244-3-201ENST00000635744 85 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 MIR1244-2-201ENST00000636449 85 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 MIR1244-4-202ENST00000636813 85 ntBASIC-1.18□□□□□ -2.6
TPM4P67936 Y_RNA.49-201ENST00000362714 112 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 RNY3P3-201ENST00000363816 102 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 RNU6-483P-201ENST00000384088 108 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 Y_RNA.473-201ENST00000384333 102 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 SNORA8.3-201ENST00000384679 139 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 SNORD75.1-201ENST00000408373 60 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 RNU7-96P-201ENST00000459535 64 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 AC010424.1-201ENST00000506336 297 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 AC084368.1-201ENST00000620935 65 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 AC124864.2-201ENST00000624736 186 ntBASIC-1.19□□□□□ -2.6
TPM4P67936 Y_RNA.125-201ENST00000363371 111 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 SNORD115-47-201ENST00000391226 86 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 AL022718.1-201ENST00000412004 84 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-1.2□□□□□ -2.6
TPM4P67936 MIR2053-201ENST00000459295 91 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 RNU6-998P-201ENST00000515894 101 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 RN7SKP295-201ENST00000517264 153 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 AC141846.1-201ENST00000568348 142 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 MIR6717-201ENST00000622747 73 ntBASIC-1.2□□□□□ -2.6
TPM4P67936 RNA5SP257-201ENST00000363023 116 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 RNU6-653P-201ENST00000363074 106 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 RNU6-1013P-201ENST00000384180 107 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 SNORA26.6-201ENST00000391256 115 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 Y_RNA.594-201ENST00000410373 140 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 AC024067.1-201ENST00000426199 223 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 RNU7-149P-201ENST00000516739 59 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 SNORA25.16-201ENST00000516741 121 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 AP001180.6-201ENST00000584918 159 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC-1.21□□□□□ -2.6
TPM4P67936 AC092794.2-201ENST00000620933 563 ntBASIC-1.21□□□□□ -2.6
TPM4P67936 MIR101-2-201ENST00000362195 79 ntBASIC-1.22□□□□□ -2.6
TPM4P67936 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.22□□□□□ -2.6
TPM4P67936 AC096720.1-201ENST00000604441 183 ntBASIC-1.22□□□□□ -2.6
TPM4P67936 AC122108.2-201ENST00000611946 526 ntBASIC-1.22□□□□□ -2.6
TPM4P67936 MTND5P26-201ENST00000426018 1752 ntBASIC-1.22□□□□□ -2.6
TPM4P67936 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-1.23□□□□□ -2.61
TPM4P67936 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 AC023449.1-201ENST00000454464 154 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 AC019235.1-201ENST00000503847 207 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 RNU6-1016P-201ENST00000516689 94 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 SNORD36C-201ENST00000516733 66 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 Y_RNA.704-201ENST00000516851 102 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 AC005357.1-201ENST00000588399 301 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 AL360085.1-201ENST00000604713 532 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 AC090617.10-201ENST00000624308 134 ntBASIC-1.23□□□□□ -2.61
TPM4P67936 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.24□□□□□ -2.61
TPM4P67936 SNORA63.5-201ENST00000363548 123 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 RNY3P4-201ENST00000384428 101 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 RNU6-780P-201ENST00000391030 104 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 SNORD78.2-201ENST00000391076 69 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 RNU6-1050P-201ENST00000410388 107 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 MTATP6P17-201ENST00000431030 672 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC-1.24□□□□□ -2.61
TPM4P67936 MTND4P19-201ENST00000446659 478 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 RNU7-141P-201ENST00000459304 62 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 RNU2-31P-201ENST00000516954 155 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 DEFB117-201ENST00000602356 141 ntBASIC-1.24□□□□□ -2.61
TPM4P67936 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 SNORD114-14-201ENST00000362723 75 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 Y_RNA.359-201ENST00000365498 102 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 RNU6-597P-201ENST00000365620 102 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 RNU6-949P-201ENST00000384040 107 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 Y_RNA.592-201ENST00000410274 109 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 MIR4790-201ENST00000577799 79 ntBASIC-1.25□□□□□ -2.61
TPM4P67936 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.25□□□□□ -2.61
TPM4P67936 RNU6-831P-201ENST00000384548 107 ntBASIC-1.26□□□□□ -2.61
TPM4P67936 SNORA69.1-201ENST00000390904 137 ntBASIC-1.26□□□□□ -2.61
TPM4P67936 RNA5SP261-201ENST00000410536 106 ntBASIC-1.26□□□□□ -2.61
TPM4P67936 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC-1.26□□□□□ -2.61
TPM4P67936 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 Y_RNA.570-201ENST00000384750 101 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 SNORA3B-201ENST00000391305 131 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 AC244505.6-201ENST00000452829 130 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 MTND5P5-201ENST00000503764 376 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 RNU6-1314P-201ENST00000517139 104 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 RNU7-161P-201ENST00000517289 62 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 AC087588.2-201ENST00000617667 426 ntBASIC-1.27□□□□□ -2.61
TPM4P67936 MIR101-1-201ENST00000362265 75 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 RNU6-593P-201ENST00000364716 112 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 Y_RNA.549-201ENST00000384657 102 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 Y_RNA.553-201ENST00000384670 102 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 Y_RNA.673-201ENST00000516306 88 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 RNA5SP169-201ENST00000517268 117 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 AC005899.2-201ENST00000584353 90 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 AC119751.7-201ENST00000600494 245 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 AC011476.5-201ENST00000615594 130 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.28□□□□□ -2.61
TPM4P67936 U8.6-201ENST00000364939 135 ntBASIC-1.29□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms