Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 Y_RNA.712-201ENST00000517011 92 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 MIR5688-201ENST00000580619 83 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 MIR378D2-201ENST00000580636 98 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 POLR3GP1-201ENST00000594073 261 ntBASIC1.62□□□□□ -2.15
HOXC13P31276 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
HOXC13P31276 RNU6-392P-201ENST00000364926 101 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 RNU6-147P-201ENST00000383983 107 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 SNORA20B-201ENST00000384220 132 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 MIR517C-201ENST00000385103 95 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 SNORA79-201ENST00000408376 140 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 RNU4-43P-201ENST00000410628 137 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 AC099513.1-201ENST00000490423 301 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 HMGN1P7-201ENST00000491722 313 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 RPL23AP54-201ENST00000495129 419 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 SNORD33.1-201ENST00000516213 88 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 RNU6-589P-201ENST00000516485 107 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 AC133485.4-201ENST00000561835 220 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 AC138907.4-201ENST00000570107 226 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 Y_RNA.757-201ENST00000578934 114 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 AP003357.1-201ENST00000604497 148 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 MIR3914-2-201ENST00000637339 95 ntBASIC1.61□□□□□ -2.15
HOXC13P31276 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.61□□□□□ -2.15
HOXC13P31276 RNU6-508P-201ENST00000363231 103 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 RNU4-41P-201ENST00000364426 143 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 RNU6-1080P-201ENST00000383982 107 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 RNU6-136P-201ENST00000384663 107 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 RNA5SP89-201ENST00000410300 108 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 AC016909.1-201ENST00000415916 166 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 MLLT10P1-201ENST00000418346 262 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 AL163195.1-201ENST00000496941 348 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 Y_RNA.692-201ENST00000516627 105 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 MIR3121-201ENST00000579680 77 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 AL049861.1-201ENST00000603130 150 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 AL359075.3-201ENST00000613288 217 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.6□□□□□ -2.15
HOXC13P31276 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.6□□□□□ -2.15
HOXC13P31276 MIR96-201ENST00000362288 78 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 Y_RNA.114-201ENST00000363265 113 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 SNORA33-201ENST00000363664 130 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 SNORA7.1-201ENST00000363750 139 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 RNU6-755P-201ENST00000364400 103 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 RNU6-597P-201ENST00000365620 102 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 RNY3P5-201ENST00000384127 102 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 Y_RNA.466-201ENST00000384294 113 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
HOXC13P31276 MIR873-201ENST00000401120 77 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.59□□□□□ -2.15
HOXC13P31276 AL158147.1-201ENST00000443970 75 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 SNORD65B-201ENST00000459126 73 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 RNU6-437P-201ENST00000459408 95 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 RNA5SP102-201ENST00000516865 106 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 MIR4709-201ENST00000577272 72 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 AC005972.2-201ENST00000604690 348 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 MIR6504-201ENST00000613520 61 ntBASIC1.59□□□□□ -2.15
HOXC13P31276 Y_RNA.35-201ENST00000362601 101 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 SNORA27.1-201ENST00000362604 124 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 SNORD1A-201ENST00000364968 72 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 RNU6-950P-201ENST00000384651 107 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 RNA5SP511-201ENST00000410487 115 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 AC009474.2-201ENST00000451383 136 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 RNU6-168P-201ENST00000516189 101 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 RNU6-197P-201ENST00000516680 100 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 MIR3937-201ENST00000580135 106 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 AC006254.2-201ENST00000603259 279 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 AC095038.3-201ENST00000634439 195 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 U6.95-201ENST00000636931 70 ntBASIC1.58□□□□□ -2.16
HOXC13P31276 RNU6-978P-201ENST00000364371 103 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 RNU6-309P-201ENST00000364573 106 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SNORD114-22-201ENST00000365423 72 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 RNU6-1323P-201ENST00000384025 107 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 Y_RNA.432-201ENST00000384087 111 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SNORD26-201ENST00000384147 75 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SNORD116-21-201ENST00000384507 92 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 MIR548A1-201ENST00000385041 97 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 MIR548A3-201ENST00000385297 97 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SNORA67.6-201ENST00000391093 99 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 AC063976.4-201ENST00000421971 163 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.57□□□□□ -2.16
HOXC13P31276 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXC13P31276 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.57□□□□□ -2.16
HOXC13P31276 RNA5SP20-201ENST00000515976 84 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 RNU6-1299P-201ENST00000516316 100 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SNORA72.7-201ENST00000516349 94 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 RNU6-781P-201ENST00000516377 101 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 Y_RNA.690-201ENST00000516603 95 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 AL929325.1-201ENST00000603096 117 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 AL670379.3-201ENST00000605040 251 ntBASIC1.57□□□□□ -2.16
HOXC13P31276 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.57□□□□□ -2.16
HOXC13P31276 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC1.57□□□□□ -2.16
HOXC13P31276 MIR450A1-201ENST00000362262 91 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 Y_RNA.91-201ENST00000363042 107 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 Y_RNA.120-201ENST00000363304 110 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 SNORA4.2-201ENST00000365313 147 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 SNORD18B-201ENST00000365659 72 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 RNU6-484P-201ENST00000384016 107 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 RNU6-203P-201ENST00000384038 104 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
HOXC13P31276 RNA5SP496-201ENST00000391240 109 ntBASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms