Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 MIR1278-201ENST00000408753 81 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 MTND3P7-201ENST00000474435 343 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 AC010424.1-201ENST00000506336 297 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 RNU6-998P-201ENST00000515894 101 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 AC022140.2-201ENST00000623500 188 ntBASIC-1.05□□□□□ -2.58
CXCL1P09341 RNU6-949P-201ENST00000384040 107 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 SNORA26.6-201ENST00000391256 115 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 SNORA3B-201ENST00000391305 131 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 RNA5SP261-201ENST00000410536 106 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 AC006210.1-201ENST00000424882 111 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC-1.06□□□□□ -2.58
CXCL1P09341 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC-1.06□□□□□ -2.58
CXCL1P09341 SNORA25.16-201ENST00000516741 121 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 RNU1-54P-201ENST00000517181 120 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 RNU7-161P-201ENST00000517289 62 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 AC022441.3-201ENST00000605737 136 ntBASIC-1.06□□□□□ -2.58
CXCL1P09341 Y_RNA.72-201ENST00000362894 103 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 RNY1P7-201ENST00000384743 110 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 MIR516B1-201ENST00000385211 90 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 FCF1P4-201ENST00000448326 183 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 AC098826.2-201ENST00000452011 651 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 AC087752.4-201ENST00000605911 462 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 AC024933.1-201ENST00000608472 348 ntBASIC-1.07□□□□□ -2.58
CXCL1P09341 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.07□□□□□ -2.58
CXCL1P09341 SNORA63.5-201ENST00000363548 123 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 RNA5SP368-201ENST00000364298 116 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 RNU6-20P-201ENST00000384106 107 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 AL590004.1-201ENST00000405321 300 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 SNORA36B-201ENST00000410438 131 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 BX276092.1-201ENST00000427368 251 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 SEPT14P3-201ENST00000439401 183 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 AL732372.2-207ENST00000445840 183 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 SEPT14P2-201ENST00000453405 183 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 AC091951.2-201ENST00000500762 203 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 SEPT14P4-201ENST00000513445 186 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 RNU6-470P-201ENST00000515954 104 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 FO082796.1-201ENST00000523795 183 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.08□□□□□ -2.58
CXCL1P09341 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.08□□□□□ -2.58
CXCL1P09341 DISC2.1-201ENST00000612827 205 ntBASIC-1.08□□□□□ -2.58
CXCL1P09341 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.08□□□□□ -2.58
CXCL1P09341 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 RNA5SP403-201ENST00000363598 108 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 RNU6-47P-201ENST00000383866 107 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 RN7SKP298-201ENST00000515950 94 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 RNU2-31P-201ENST00000516954 155 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 AP001328.1-201ENST00000528550 176 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 AC105081.1-201ENST00000617727 106 ntBASIC-1.09□□□□□ -2.58
CXCL1P09341 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-1.1□□□□□ -2.59
CXCL1P09341 RNU6-626P-201ENST00000363354 107 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 Y_RNA.409-201ENST00000383990 98 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 AC024067.1-201ENST00000426199 223 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 AC023449.1-201ENST00000454464 154 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.1□□□□□ -2.59
CXCL1P09341 RNU6-138P-201ENST00000515952 107 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 MIR4436A-201ENST00000585278 85 ntBASIC-1.1□□□□□ -2.59
CXCL1P09341 RNU6-509P-201ENST00000363519 107 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 SNORA75-201ENST00000384158 137 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 SNORD115-47-201ENST00000391226 86 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 MTND4P28-201ENST00000426217 387 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 RNU7-104P-201ENST00000459398 79 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 SNORD36C-201ENST00000516733 66 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 RNU7-149P-201ENST00000516739 59 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 IGKV1-22-201ENST00000524313 326 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 AC063944.3-201ENST00000609969 533 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 AL603755.1-201ENST00000619504 163 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 AC093726.3-201ENST00000637588 150 ntBASIC-1.11□□□□□ -2.59
CXCL1P09341 RNU6-702P-201ENST00000364982 107 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 AC074085.1-201ENST00000413598 418 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 MTND1P2-201ENST00000430604 821 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 AL445567.1-201ENST00000439121 144 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 MIR3681-201ENST00000580089 72 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 MIR3942-201ENST00000585264 109 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 AC122108.2-201ENST00000611946 526 ntBASIC-1.12□□□□□ -2.59
CXCL1P09341 Y_RNA.56-201ENST00000362798 112 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 RNU4-58P-201ENST00000363192 141 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 RNU6-1292P-201ENST00000383856 107 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 SNORD24-201ENST00000383884 75 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 RNA5SP25-201ENST00000410815 110 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 RN7SKP295-201ENST00000517264 153 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 MIR6128-201ENST00000615528 109 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.13□□□□□ -2.59
CXCL1P09341 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.14□□□□□ -2.59
CXCL1P09341 RNU6-597P-201ENST00000365620 102 ntBASIC-1.14□□□□□ -2.59
CXCL1P09341 RNU6-864P-201ENST00000516256 108 ntBASIC-1.14□□□□□ -2.59
CXCL1P09341 AC091931.1-201ENST00000623488 728 ntBASIC-1.14□□□□□ -2.59
CXCL1P09341 RNU7-141P-201ENST00000459304 62 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 AC010655.3-201ENST00000478818 450 ntBASIC-1.15□□□□□ -2.59
CXCL1P09341 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.15□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 190.5 ms