Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 POLR3GP2-201ENST00000588366 668 ntBASIC-1.02□□□□□ -2.57
SPTA1P02549 U2.17-201ENST00000611454 95 ntBASIC-1.02□□□□□ -2.57
SPTA1P02549 SNORA18-201ENST00000384416 132 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MIR1-2-201ENST00000384961 85 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 AC073415.1-201ENST00000449240 153 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MTND1P27-201ENST00000451117 902 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MTCO2P30-201ENST00000503662 364 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-1.03□□□□□ -2.57
SPTA1P02549 AC009878.1-201ENST00000621819 340 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNU6-571P-201ENST00000384128 107 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNU6-281P-201ENST00000384212 103 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNU6-479P-201ENST00000516348 105 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNU6-118P-201ENST00000516552 102 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-1.03□□□□□ -2.57
SPTA1P02549 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.03□□□□□ -2.57
SPTA1P02549 MIR4775-201ENST00000581168 75 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MIR4520-1-201ENST00000582609 70 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 YWHAEP3-201ENST00000582767 121 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MIR548AE1-201ENST00000583292 70 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 MIR5692C1-201ENST00000585309 91 ntBASIC-1.03□□□□□ -2.57
SPTA1P02549 RNA5SP133-201ENST00000363368 119 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 SNORD77.3-201ENST00000391113 65 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 MTCYBP36-201ENST00000404146 440 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-1203P-201ENST00000410703 110 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 EIF1P2-201ENST00000428233 350 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU7-74P-201ENST00000459104 62 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RPS29P24-201ENST00000486345 171 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-998P-201ENST00000515894 101 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 SNORA19.2-201ENST00000516013 114 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU7-79P-201ENST00000516082 62 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 Y_RNA.672-201ENST00000516289 104 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-531P-201ENST00000516694 104 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 AP003357.1-201ENST00000604497 148 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 SEPT14P19-203ENST00000633205 211 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-1260P-201ENST00000362944 107 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-433P-201ENST00000363216 104 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 Y_RNA.110-201ENST00000363220 99 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-280P-201ENST00000364145 104 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-576P-201ENST00000390854 102 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC-1.04□□□□□ -2.58
SPTA1P02549 MTND3P21-201ENST00000433774 331 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU7-175P-201ENST00000515915 61 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-1114P-201ENST00000516022 107 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU1-54P-201ENST00000517181 120 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 AC022441.3-201ENST00000605737 136 ntBASIC-1.04□□□□□ -2.58
SPTA1P02549 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 RNU4-58P-201ENST00000363192 141 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 SNORA36B-201ENST00000410438 131 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 RNU6-195P-201ENST00000411352 109 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC-1.05□□□□□ -2.58
SPTA1P02549 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.05□□□□□ -2.58
SPTA1P02549 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC-1.05□□□□□ -2.58
SPTA1P02549 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.05□□□□□ -2.58
SPTA1P02549 RNU6-966P-201ENST00000516479 104 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC-1.05□□□□□ -2.58
SPTA1P02549 YWHAEP2-201ENST00000580066 112 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC087683.2-201ENST00000611384 326 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC006927.2-201ENST00000639256 389 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC099654.13-201ENST00000639774 207 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 MIR302B-201ENST00000362188 73 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 RNU6-517P-201ENST00000384362 110 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AL365203.2-201ENST00000423444 196 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC108059.2-201ENST00000434626 151 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.05□□□□□ -2.58
SPTA1P02549 snoU13.13-201ENST00000458842 104 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC112204.1-201ENST00000502591 103 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 TRAJ51-201ENST00000504127 63 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 RNU5B-6P-201ENST00000516765 68 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 AC132825.6-201ENST00000638861 357 ntBASIC-1.05□□□□□ -2.58
SPTA1P02549 Y_RNA.128-201ENST00000363391 112 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 Y_RNA.407-201ENST00000383986 113 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-291P-201ENST00000384720 107 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 SNORA40.5-201ENST00000391061 128 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 AL031003.1-201ENST00000404229 172 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MIR548H3-201ENST00000408771 118 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 Y_RNA.608-201ENST00000410647 95 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-189P-201ENST00000516120 101 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-1.06□□□□□ -2.58
SPTA1P02549 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.06□□□□□ -2.58
SPTA1P02549 AC005771.1-201ENST00000585581 349 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 AL163152.1-201ENST00000642001 374 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 SNORD115-25-201ENST00000362619 82 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MIR582-201ENST00000365731 98 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-154P-201ENST00000384306 106 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-550P-201ENST00000391057 101 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC-1.06□□□□□ -2.58
SPTA1P02549 RNA5SP484-201ENST00000458857 111 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU7-134P-201ENST00000458997 64 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 Y_RNA.631-201ENST00000459607 101 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU6-1012P-201ENST00000516606 109 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 RNU7-188P-201ENST00000517063 64 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 MTND4P7-201ENST00000523876 130 ntBASIC-1.06□□□□□ -2.58
SPTA1P02549 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC-1.06□□□□□ -2.58
SPTA1P02549 MIR5583-1-201ENST00000580941 59 ntBASIC-1.06□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 267.5 ms