Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RNU4-57P-201ENST00000515980 135 ntBASIC1.07□□□□□ -2.24
DDX58O95786 RNU6-693P-201ENST00000516134 107 ntBASIC1.07□□□□□ -2.24
DDX58O95786 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.07□□□□□ -2.24
DDX58O95786 AC109810.1-201ENST00000534066 224 ntBASIC1.07□□□□□ -2.24
DDX58O95786 AL117187.1-201ENST00000555482 181 ntBASIC1.07□□□□□ -2.24
DDX58O95786 AC012433.1-201ENST00000588916 398 ntBASIC1.07□□□□□ -2.24
DDX58O95786 MIR4791-201ENST00000607666 84 ntBASIC1.07□□□□□ -2.24
DDX58O95786 Y_RNA.241-201ENST00000364470 117 ntBASIC1.06□□□□□ -2.24
DDX58O95786 RNU6-738P-201ENST00000384531 106 ntBASIC1.06□□□□□ -2.24
DDX58O95786 MIR548F4-201ENST00000408515 105 ntBASIC1.06□□□□□ -2.24
DDX58O95786 RNU6-847P-201ENST00000411115 108 ntBASIC1.06□□□□□ -2.24
DDX58O95786 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.06□□□□□ -2.24
DDX58O95786 AC100767.1-201ENST00000528178 123 ntBASIC1.06□□□□□ -2.24
DDX58O95786 AP003716.2-201ENST00000528260 108 ntBASIC1.06□□□□□ -2.24
DDX58O95786 AC108706.1-201ENST00000611053 297 ntBASIC1.06□□□□□ -2.24
DDX58O95786 AC243994.1-201ENST00000618627 109 ntBASIC1.06□□□□□ -2.24
DDX58O95786 PVT1_3.1-201ENST00000620853 95 ntBASIC1.06□□□□□ -2.24
DDX58O95786 AL442644.1-201ENST00000454390 3105 ntBASIC1.06□□□□□ -2.24
DDX58O95786 RNU6-1309P-201ENST00000363305 108 ntBASIC1.05□□□□□ -2.24
DDX58O95786 Y_RNA.537-201ENST00000384626 109 ntBASIC1.05□□□□□ -2.24
DDX58O95786 MIR598-201ENST00000384868 97 ntBASIC1.05□□□□□ -2.24
DDX58O95786 POLR2J4-204ENST00000418424 324 ntBASIC1.05□□□□□ -2.24
DDX58O95786 RNU6-365P-201ENST00000517113 106 ntBASIC1.05□□□□□ -2.24
DDX58O95786 CYP3A137P-201ENST00000562436 69 ntBASIC1.05□□□□□ -2.24
DDX58O95786 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.05□□□□□ -2.24
DDX58O95786 AL360085.1-201ENST00000604713 532 ntBASIC1.05□□□□□ -2.24
DDX58O95786 Y_RNA.396-201ENST00000383949 103 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RPS3AP1-201ENST00000413190 320 ntBASIC1.04□□□□□ -2.24
DDX58O95786 AC067940.1-201ENST00000458411 300 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RNU7-67P-201ENST00000459003 62 ntBASIC1.04□□□□□ -2.24
DDX58O95786 ACA64.5-201ENST00000516207 127 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RNU6-327P-201ENST00000516270 127 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RNU6-126P-201ENST00000516685 103 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RNU11-2P-201ENST00000516898 142 ntBASIC1.04□□□□□ -2.24
DDX58O95786 RNU6-1270P-201ENST00000517128 108 ntBASIC1.04□□□□□ -2.24
DDX58O95786 AC131055.1-201ENST00000584626 316 ntBASIC1.04□□□□□ -2.24
DDX58O95786 MTND1P7-201ENST00000632801 297 ntBASIC1.04□□□□□ -2.24
DDX58O95786 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.03□□□□□ -2.24
DDX58O95786 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.03□□□□□ -2.24
DDX58O95786 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.82-201ENST00000363000 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.92-201ENST00000363043 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 SNORD115-28-201ENST00000363931 81 ntBASIC1.03□□□□□ -2.24
DDX58O95786 SNORD114-2-201ENST00000363953 78 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.235-201ENST00000364412 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.306-201ENST00000365015 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.312-201ENST00000365089 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.322-201ENST00000365151 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 MT-TT-201ENST00000387460 66 ntBASIC1.03□□□□□ -2.24
DDX58O95786 RNU2-70P-201ENST00000410718 179 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.622-201ENST00000411091 108 ntBASIC1.03□□□□□ -2.24
DDX58O95786 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.03□□□□□ -2.24
DDX58O95786 AC004941.2-201ENST00000427009 228 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.650-201ENST00000459002 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 RNU6-1299P-201ENST00000516316 100 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.777-201ENST00000516982 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 MIR5000-201ENST00000577717 103 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.771-201ENST00000598668 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.789-201ENST00000622480 102 ntBASIC1.03□□□□□ -2.24
DDX58O95786 Y_RNA.199-201ENST00000364014 102 ntBASIC1.02□□□□□ -2.25
DDX58O95786 Y_RNA.277-201ENST00000364754 102 ntBASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
DDX58O95786 Y_RNA.288-201ENST00000364854 92 ntBASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-396P-201ENST00000365369 105 ntBASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-472P-201ENST00000384299 107 ntBASIC1.02□□□□□ -2.25
DDX58O95786 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-994P-201ENST00000410507 111 ntBASIC1.02□□□□□ -2.25
DDX58O95786 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC1.02□□□□□ -2.25
DDX58O95786 SNORD2.1-201ENST00000458762 69 ntBASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-351P-201ENST00000516097 100 ntBASIC1.02□□□□□ -2.25
DDX58O95786 RNU6-504P-201ENST00000516568 104 ntBASIC1.02□□□□□ -2.25
DDX58O95786 MIR548AO-201ENST00000579992 96 ntBASIC1.02□□□□□ -2.25
DDX58O95786 AL365265.1-201ENST00000621045 234 ntBASIC1.02□□□□□ -2.25
DDX58O95786 MIR6516-201ENST00000630554 81 ntBASIC1.02□□□□□ -2.25
DDX58O95786 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.01□□□□□ -2.25
DDX58O95786 RNU1-36P-201ENST00000365130 165 ntBASIC1.01□□□□□ -2.25
DDX58O95786 Y_RNA.352-201ENST00000365439 102 ntBASIC1.01□□□□□ -2.25
DDX58O95786 Y_RNA.416-201ENST00000384014 113 ntBASIC1.01□□□□□ -2.25
DDX58O95786 SNORD61-201ENST00000384252 73 ntBASIC1.01□□□□□ -2.25
DDX58O95786 SNORA2B-201ENST00000384583 137 ntBASIC1.01□□□□□ -2.25
DDX58O95786 SNORA26-201ENST00000391286 122 ntBASIC1.01□□□□□ -2.25
DDX58O95786 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.01□□□□□ -2.25
DDX58O95786 MIR2115-201ENST00000516657 100 ntBASIC1.01□□□□□ -2.25
DDX58O95786 RNU6-958P-201ENST00000516995 106 ntBASIC1.01□□□□□ -2.25
DDX58O95786 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.01□□□□□ -2.25
DDX58O95786 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.01□□□□□ -2.25
DDX58O95786 Y_RNA.162-201ENST00000363683 102 ntBASIC1□□□□□ -2.25
DDX58O95786 RNU6-654P-201ENST00000364373 107 ntBASIC1□□□□□ -2.25
DDX58O95786 RNU6-342P-201ENST00000384521 104 ntBASIC1□□□□□ -2.25
DDX58O95786 AL606845.1-201ENST00000404881 255 ntBASIC1□□□□□ -2.25
DDX58O95786 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1□□□□□ -2.25
DDX58O95786 MIR1302-3-201ENST00000408128 138 ntBASIC1□□□□□ -2.25
DDX58O95786 MIR1302-7-201ENST00000408841 72 ntBASIC1□□□□□ -2.25
DDX58O95786 RNA5SP95-201ENST00000410319 137 ntBASIC1□□□□□ -2.25
DDX58O95786 RNU2-38P-201ENST00000410856 79 ntBASIC1□□□□□ -2.25
DDX58O95786 MTND2P23-201ENST00000422990 651 ntBASIC1□□□□□ -2.25
DDX58O95786 AL392103.1-201ENST00000447000 198 ntBASIC1□□□□□ -2.25
DDX58O95786 AC087499.4-201ENST00000448505 178 ntBASIC1□□□□□ -2.25
DDX58O95786 RNA5SP436-201ENST00000516020 115 ntBASIC1□□□□□ -2.25
DDX58O95786 AC007751.1-201ENST00000529260 376 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 260.7 ms