Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNORA4-201ENST00000584302 138 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 SNORD115-40-201ENST00000606510 82 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 AC006441.5-201ENST00000612680 209 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 5S_rRNA.11-201ENST00000618635 84 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 MIR6132-201ENST00000622083 109 ntBASIC2.73□□□□□ -1.97
GRIN3BO60391 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
GRIN3BO60391 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.72□□□□□ -1.97
GRIN3BO60391 Y_RNA.220-201ENST00000364244 109 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 snoU2-30.1-201ENST00000365012 70 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 RNU6-442P-201ENST00000383968 104 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 Y_RNA.540-201ENST00000384638 111 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
GRIN3BO60391 MIR1283-2-201ENST00000408621 87 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 RPS3AP1-201ENST00000413190 320 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 AC026421.1-201ENST00000519101 163 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.72□□□□□ -1.97
GRIN3BO60391 MIR3129-201ENST00000581095 76 ntBASIC2.72□□□□□ -1.97
GRIN3BO60391 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
GRIN3BO60391 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
GRIN3BO60391 SNORD14E-201ENST00000364009 85 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 SNORA25.6-201ENST00000364121 118 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 Y_RNA.265-201ENST00000364677 108 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 Y_RNA.336-201ENST00000365307 109 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 Y_RNA.362-201ENST00000365518 110 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 Y_RNA.366-201ENST00000365540 102 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 MIR802-201ENST00000390235 94 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.71□□□□□ -1.98
GRIN3BO60391 RNA5SP109-201ENST00000391010 116 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 MTATP6P21-201ENST00000440681 189 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 RNA5SP57-201ENST00000459463 123 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 RNU6-693P-201ENST00000516134 107 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 RNU6-904P-201ENST00000516206 101 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 RNA5SP200-201ENST00000516360 103 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 RNU6-1270P-201ENST00000517128 108 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 SNORA28-201ENST00000606769 126 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 MIR8054-201ENST00000620877 86 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GRIN3BO60391 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
GRIN3BO60391 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.71□□□□□ -1.98
GRIN3BO60391 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.7□□□□□ -1.98
GRIN3BO60391 MIR518A2-201ENST00000384966 87 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 MIR518F-201ENST00000384973 87 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 RNA5SP270-201ENST00000411361 118 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC2.7□□□□□ -1.98
GRIN3BO60391 SNRPGP14-201ENST00000435400 219 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 AF228730.3-201ENST00000436691 102 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 COX6CP6-201ENST00000490840 228 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.7□□□□□ -1.98
GRIN3BO60391 MIR4658-201ENST00000584344 65 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 Y_RNA.818-201ENST00000618813 71 ntBASIC2.7□□□□□ -1.98
GRIN3BO60391 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
GRIN3BO60391 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
GRIN3BO60391 RNU6-1084P-201ENST00000362498 107 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 Y_RNA.244-201ENST00000364484 109 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 RNU11-3P-201ENST00000391111 133 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 HMGN2P39-201ENST00000398005 273 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 RNA5SP136-201ENST00000410906 107 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 SCARNA16.3-201ENST00000516595 184 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 MIR5009-201ENST00000578736 100 ntBASIC2.69□□□□□ -1.98
GRIN3BO60391 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC2.69□□□□□ -1.98
GRIN3BO60391 Y_RNA.17-201ENST00000362433 111 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 RNU6-1125P-201ENST00000363601 107 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 RNU6-457P-201ENST00000363999 107 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 SNORA63D-201ENST00000364359 132 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 RNU6-950P-201ENST00000384651 107 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 MIR597-201ENST00000384968 97 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 SNORD77.3-201ENST00000391113 65 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 MIR548O-201ENST00000408583 114 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 PGBD4P5-201ENST00000445958 426 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 RNU6-893P-201ENST00000458841 100 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 AC107297.1-201ENST00000459991 176 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 RNU6-830P-201ENST00000516353 107 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 SNORD45.4-201ENST00000516629 73 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 SCARNA15-202ENST00000516881 127 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 MIR5094-201ENST00000578766 85 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 MIR376A2-201ENST00000636782 80 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 AC245060.5-201ENST00000610778 3293 ntBASIC2.68□□□□□ -1.98
GRIN3BO60391 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
GRIN3BO60391 RNU6-268P-201ENST00000364174 107 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 Y_RNA.410-201ENST00000383992 113 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 RNU6-1113P-201ENST00000384348 107 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 SNORA40.18-201ENST00000391200 128 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 AP1B1P2-201ENST00000416196 106 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
GRIN3BO60391 FO624990.1-201ENST00000636373 85 ntBASIC2.67□□□□□ -1.98
GRIN3BO60391 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
GRIN3BO60391 Y_RNA.49-201ENST00000362714 112 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 Y_RNA.73-201ENST00000362910 113 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 Y_RNA.78-201ENST00000362970 110 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 Y_RNA.344-201ENST00000365381 112 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
GRIN3BO60391 SNORA48.1-201ENST00000390879 135 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 AC022137.1-201ENST00000483735 151 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 SNORA31.10-201ENST00000516482 106 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 AC068339.1-201ENST00000526965 141 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 AL137067.1-201ENST00000615933 120 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 MIR6766-201ENST00000622641 72 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 AC027279.3-201ENST00000625055 122 ntBASIC2.66□□□□□ -1.98
GRIN3BO60391 AL589743.1-201ENST00000551932 2712 ntBASIC2.65□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 198.9 ms