Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 MIR6717-201ENST00000622747 73 ntBASIC-1.1□□□□□ -2.59
HMGB3O15347 AC022140.2-201ENST00000623500 188 ntBASIC-1.1□□□□□ -2.59
HMGB3O15347 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 Y_RNA.246-201ENST00000364495 108 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD116-9-201ENST00000384000 95 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU6-20P-201ENST00000384106 107 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORA75-201ENST00000384158 137 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD116-3-201ENST00000384287 95 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD116-8-201ENST00000384365 95 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD116-7-201ENST00000384404 95 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD116-5-201ENST00000384462 95 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 SNORD41.1-201ENST00000391000 69 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 MTATP6P17-201ENST00000431030 672 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU7-96P-201ENST00000459535 64 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 AC091951.2-201ENST00000500762 203 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU6-470P-201ENST00000515954 104 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU1-54P-201ENST00000517181 120 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU7-161P-201ENST00000517289 62 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 AC141846.1-201ENST00000568348 142 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 AC022441.3-201ENST00000605737 136 ntBASIC-1.11□□□□□ -2.59
HMGB3O15347 RNU6-653P-201ENST00000363074 106 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 RNU6-626P-201ENST00000363354 107 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 SNORA63.5-201ENST00000363548 123 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 U8.6-201ENST00000364939 135 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 RNU6-1162P-201ENST00000384443 104 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 SNORD110-201ENST00000408189 75 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 Y_RNA.610-201ENST00000410681 103 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 AC244505.6-201ENST00000452829 130 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 RNU6-998P-201ENST00000515894 101 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 SCARNA20.2-201ENST00000516052 116 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 DISC2.1-201ENST00000612827 205 ntBASIC-1.12□□□□□ -2.59
HMGB3O15347 RNU6-1085P-201ENST00000363576 107 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 RNU6-949P-201ENST00000384040 107 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 Y_RNA.587-201ENST00000391210 103 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 SNORA36B-201ENST00000410438 131 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 FCF1P4-201ENST00000448326 183 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 AC098826.2-201ENST00000452011 651 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 RN7SKP298-201ENST00000515950 94 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 SNORA25.13-201ENST00000516395 103 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 MIR3942-201ENST00000585264 109 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 AC091931.1-201ENST00000623488 728 ntBASIC-1.13□□□□□ -2.59
HMGB3O15347 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-1.13□□□□□ -2.59
HMGB3O15347 MIR516B1-201ENST00000385211 90 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 SNORD83B-201ENST00000386745 93 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 RNA5SP25-201ENST00000410815 110 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 BX276092.1-201ENST00000427368 251 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 SEPT14P3-201ENST00000439401 183 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 MTATP6P23-201ENST00000440153 476 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 AL732372.2-207ENST00000445840 183 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 SEPT14P2-201ENST00000453405 183 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 SEPT14P4-201ENST00000513445 186 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 RNA5SP66-201ENST00000517178 101 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 FO082796.1-201ENST00000523795 183 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 AC105081.1-201ENST00000617727 106 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 AL603755.1-201ENST00000619504 163 ntBASIC-1.14□□□□□ -2.59
HMGB3O15347 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC-1.15□□□□□ -2.59
HMGB3O15347 Y_RNA.230-201ENST00000364348 109 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 RNU6-597P-201ENST00000365620 102 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 RNU6-1144P-201ENST00000384247 104 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 Y_RNA.582-201ENST00000391023 95 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC-1.15□□□□□ -2.59
HMGB3O15347 AC006210.1-201ENST00000424882 111 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 Y_RNA.681-201ENST00000516445 113 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 MIR6128-201ENST00000615528 109 ntBASIC-1.15□□□□□ -2.59
HMGB3O15347 MIR7-2-201ENST00000384970 110 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 MIR1265-201ENST00000408444 86 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 SPINT5P-201ENST00000448174 155 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 Y_RNA.693-201ENST00000516641 110 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 SNORD36C-201ENST00000516733 66 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 RNU7-149P-201ENST00000516739 59 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 RNU2-31P-201ENST00000516954 155 ntBASIC-1.16□□□□□ -2.6
HMGB3O15347 Y_RNA.30-201ENST00000362572 97 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 RNA5SP403-201ENST00000363598 108 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 MIR635-201ENST00000384830 98 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 AC074085.1-201ENST00000413598 418 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 MTND4P28-201ENST00000426217 387 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.17□□□□□ -2.6
HMGB3O15347 AC011373.1-201ENST00000607270 237 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 AC122108.2-201ENST00000611946 526 ntBASIC-1.17□□□□□ -2.6
HMGB3O15347 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-1.17□□□□□ -2.6
HMGB3O15347 RNU6-702P-201ENST00000364982 107 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 RNU6-1138P-201ENST00000365359 106 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 Y_RNA.436-201ENST00000384097 102 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 RNA5SP261-201ENST00000410536 106 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 RNU7-104P-201ENST00000459398 79 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 MTND3P3-201ENST00000505004 126 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 RNU6-1170P-201ENST00000515974 106 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 RNU6-864P-201ENST00000516256 108 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 MIR548AX-201ENST00000580117 73 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 AC063944.3-201ENST00000609969 533 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 AL050303.3-201ENST00000613704 284 ntBASIC-1.18□□□□□ -2.6
HMGB3O15347 Y_RNA.7-201ENST00000362352 102 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 Y_RNA.274-201ENST00000364714 101 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 Y_RNA.371-201ENST00000365591 113 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 Y_RNA.430-201ENST00000384081 110 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 SNORD115-47-201ENST00000391226 86 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 MTND1P2-201ENST00000430604 821 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 SCARNA17-201ENST00000516183 144 ntBASIC-1.19□□□□□ -2.6
HMGB3O15347 Y_RNA.692-201ENST00000516627 105 ntBASIC-1.19□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 240.6 ms