Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AP003484.1-201ENST00000530974 250 ntBASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR548AR-201ENST00000582191 57 ntBASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 FAM106DP-201ENST00000586416 501 ntBASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AP001485.1-201ENST00000604799 199 ntBASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC1.4□□□□□ -2.19
SAA2-SAA4A0A096LPE2 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-309P-201ENST00000364573 106 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-1189P-201ENST00000383958 107 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 TMSB4XP3-201ENST00000445144 114 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC087499.4-201ENST00000448505 178 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.651-201ENST00000459380 103 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RPS26P48-201ENST00000491713 339 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA18.7-201ENST00000516910 131 ntBASIC1.39□□□□□ -2.19
SAA2-SAA4A0A096LPE2 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.120-201ENST00000363304 110 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.218-201ENST00000364218 104 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.280-201ENST00000364765 112 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA2.2-201ENST00000365473 135 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNA5SP259-201ENST00000365541 109 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD41-201ENST00000386967 70 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA40-201ENST00000388090 126 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU2-13P-201ENST00000515909 113 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-971P-201ENST00000516920 106 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR6845-201ENST00000613182 61 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 U2.22-201ENST00000636441 106 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC132825.6-201ENST00000638861 357 ntBASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA19-201ENST00000384737 128 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR570-201ENST00000384917 97 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 U8.13-201ENST00000390842 128 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA40.5-201ENST00000391061 128 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC008834.1-201ENST00000511612 175 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA74.3-201ENST00000517108 154 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AP001328.1-201ENST00000528550 176 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR3121-201ENST00000579680 77 ntBASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.241-201ENST00000364470 117 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNA5SP363-201ENST00000365072 115 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-997P-201ENST00000384725 107 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AL603914.1-201ENST00000401964 204 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-250P-201ENST00000516958 103 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-789P-201ENST00000517105 102 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC090821.2-201ENST00000523552 176 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC090049.2-201ENST00000550377 109 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC091895.1-201ENST00000624494 256 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 WWP1P1-201ENST00000466609 2769 ntBASIC1.36□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-34-201ENST00000362441 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-12-201ENST00000362583 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-29-201ENST00000362834 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-9-201ENST00000362912 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-21-201ENST00000362963 81 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-14-201ENST00000363090 81 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-13-201ENST00000363358 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-41-201ENST00000363608 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-11-201ENST00000363616 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-5-201ENST00000363633 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-39-201ENST00000363694 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-4-201ENST00000363810 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-16-201ENST00000363887 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-6-201ENST00000363942 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-42-201ENST00000364273 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-15-201ENST00000364809 81 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-1-201ENST00000364961 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD1A-201ENST00000364968 72 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-26-201ENST00000365067 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-10-201ENST00000365073 81 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-43-201ENST00000365503 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.370-201ENST00000365589 108 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-36-201ENST00000365629 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA27-201ENST00000384323 126 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-959P-201ENST00000384671 107 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR30A-201ENST00000385092 71 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR934-201ENST00000401241 83 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 Y_RNA.690-201ENST00000516603 95 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC108081.1-201ENST00000604358 221 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORD115-40-201ENST00000606510 82 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR8081-201ENST00000611533 95 ntBASIC1.35□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SNORA24-201ENST00000384096 131 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AL627390.1-201ENST00000396055 340 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 snoU13.25-201ENST00000458945 104 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-922P-201ENST00000516753 99 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-1234P-201ENST00000516877 103 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 RNU6-295P-201ENST00000516901 104 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 IGKV1-22-201ENST00000524313 326 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AL022345.2-201ENST00000606307 135 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 U7.2-201ENST00000607576 63 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 MIR8063-201ENST00000621930 81 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 AC091932.4-201ENST00000623386 200 ntBASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC1.34□□□□□ -2.19
SAA2-SAA4A0A096LPE2 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 Y_RNA.525-201ENST00000384570 113 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 HSPE1P24-201ENST00000450782 238 ntBASIC1.33□□□□□ -2.2
SAA2-SAA4A0A096LPE2 snoU13.9-201ENST00000458927 103 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 213.4 ms