Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 MIR376A2-201ENST00000636782 80 ntBASIC1.91□□□□□ -2.1
CCDC187A0A096LP49 RNU6-888P-201ENST00000363010 101 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.265-201ENST00000364677 108 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.369-201ENST00000365568 117 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-32P-201ENST00000383948 107 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-13P-201ENST00000384248 107 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 SNORD61-201ENST00000384252 73 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-12P-201ENST00000384604 107 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-41P-201ENST00000384741 107 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNA5SP482-201ENST00000391269 118 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-554P-201ENST00000410466 106 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 HMGN2P19-201ENST00000425149 265 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 AF228730.3-201ENST00000436691 102 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 HSPE1P9-201ENST00000440046 311 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 HMGN1P7-201ENST00000491722 313 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 SNORA18.4-201ENST00000516440 124 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 SNORA31.10-201ENST00000516482 106 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 SNORA31.17-201ENST00000516953 127 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 MIR3129-201ENST00000581095 76 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 AC006254.2-201ENST00000603259 279 ntBASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
CCDC187A0A096LP49 RNU6-640P-201ENST00000363693 105 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.253-201ENST00000364562 112 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 SNORA4.2-201ENST00000365313 147 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 SNORD18B-201ENST00000365659 72 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 RNU6-905P-201ENST00000384434 107 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 MIR676-201ENST00000390702 67 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 SNORD72-201ENST00000390994 80 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 SNORD77.3-201ENST00000391113 65 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 AL031737.1-201ENST00000450125 223 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 RNU6-365P-201ENST00000517113 106 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 AC008507.4-201ENST00000585464 127 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 JPX_2.1-201ENST00000614161 69 ntBASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
CCDC187A0A096LP49 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.348-201ENST00000365403 103 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 SNORD24-201ENST00000383884 75 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 AL034345.1-201ENST00000407768 123 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 RNU2-40P-201ENST00000410833 196 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 STAG3L5P-204ENST00000443759 179 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 AC023449.1-201ENST00000454464 154 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 snoU13.27-201ENST00000459278 104 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 RPS29P24-201ENST00000486345 171 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 AC108729.3-201ENST00000513484 108 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 RNU6-504P-201ENST00000516568 104 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 MIR4709-201ENST00000577272 72 ntBASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.85-201ENST00000363014 111 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 RNU6-1107P-201ENST00000364817 104 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.549-201ENST00000384657 102 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 RNU6-1031P-201ENST00000384773 107 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 MIR518F-201ENST00000384973 87 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 RNU6-360P-201ENST00000390944 104 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 RNA5SP247-201ENST00000411181 105 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.714-201ENST00000517065 90 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 AL591926.4-201ENST00000616895 298 ntBASIC1.87□□□□□ -2.11
CCDC187A0A096LP49 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 MIR126-201ENST00000362291 85 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.4-201ENST00000362333 112 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.328-201ENST00000365208 113 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.528-201ENST00000384575 108 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 MIR570-201ENST00000384917 97 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 SNRPGP10-201ENST00000432323 225 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 MTATP6P21-201ENST00000440681 189 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 RNU7-34P-201ENST00000459394 64 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.666-201ENST00000516187 112 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 RNU6-113P-201ENST00000516653 101 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 RNU6-1149P-201ENST00000516810 97 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 RNU6-537P-201ENST00000517277 103 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 AC007012.1-201ENST00000567192 175 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 MIR4498-201ENST00000577599 66 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 uc_338.20-201ENST00000621563 178 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 AL035470.1-201ENST00000622571 220 ntBASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CCDC187A0A096LP49 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.164-201ENST00000363709 102 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.366-201ENST00000365540 102 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 MIR1263-201ENST00000408324 86 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 RNA5SP136-201ENST00000410906 107 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 FTH1P12-201ENST00000432137 551 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 COX6CP6-201ENST00000490840 228 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 Y_RNA.677-201ENST00000516401 85 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 RNU6-1270P-201ENST00000517128 108 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 MIR5002-201ENST00000584713 97 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 MIR4762-201ENST00000585261 75 ntBASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC187A0A096LP49 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 311.9 ms