Protein–RNA interactions for Protein: Q9Y5H0

PCDHGA3, Protocadherin gamma-A3, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3Q9Y5H0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR302D-201ENST00000362275 68 ntBASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.66-201ENST00000362862 102 ntBASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.91-201ENST00000363042 107 ntBASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORA25.7-201ENST00000364375 127 ntBASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 AC015726.2-201ENST00000620112 122 ntBASIC1.86□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORD115-28-201ENST00000363931 81 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.410-201ENST00000383992 113 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORD61-201ENST00000384252 73 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.547-201ENST00000384654 119 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 SNORA40.18-201ENST00000391200 128 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 RPL31P63-201ENST00000422565 375 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 AC005908.1-201ENST00000468701 347 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
PCDHGA3Q9Y5H0 RNU6-597P-201ENST00000365620 102 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.464-201ENST00000384282 110 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR516B2-201ENST00000385190 85 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 AL445685.2-201ENST00000422551 342 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 AC107297.1-201ENST00000459991 176 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 RPL30P7-201ENST00000479312 323 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.676-201ENST00000516393 96 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR3646-201ENST00000578301 84 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 MIR5089-201ENST00000580047 84 ntBASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
PCDHGA3Q9Y5H0 Y_RNA.150-201ENST00000363562 102 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-1292P-201ENST00000383856 107 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR526A1-201ENST00000384897 85 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 AC027119.1-201ENST00000440877 241 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 AC092991.1-201ENST00000477176 376 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-917P-201ENST00000516294 104 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU7-25P-201ENST00000516544 62 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU7-121P-201ENST00000516604 62 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA74.3-201ENST00000517108 154 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR3122-201ENST00000577243 73 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR3683-201ENST00000580847 82 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 GHRLOS.1-201ENST00000610995 70 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.83□□□□□ -2.12
PCDHGA3Q9Y5H0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-978P-201ENST00000364371 103 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.272-201ENST00000364696 102 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.393-201ENST00000383936 102 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 U8.17-201ENST00000391292 132 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 RNA5SP445-201ENST00000515889 115 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU7-43P-201ENST00000516554 64 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-1270P-201ENST00000517128 108 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 AL365205.2-201ENST00000594586 68 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 SNRPGP19-201ENST00000603826 189 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PCDHGA3Q9Y5H0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-209P-201ENST00000384118 107 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR518F-201ENST00000384973 87 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.580-201ENST00000391004 95 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 DNAJC19P2-201ENST00000593340 302 ntBASIC1.81□□□□□ -2.12
PCDHGA3Q9Y5H0 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.338-201ENST00000365320 114 ntBASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD123-201ENST00000459473 70 ntBASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU4-57P-201ENST00000515980 135 ntBASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 AL365434.2-201ENST00000607979 234 ntBASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 MTND1P7-201ENST00000632801 297 ntBASIC1.8□□□□□ -2.12
PCDHGA3Q9Y5H0 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 Y_RNA.37-201ENST00000362606 108 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-449P-201ENST00000383914 107 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA40.5-201ENST00000391061 128 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 PCNPP3-201ENST00000393579 471 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 AL627390.1-201ENST00000396055 340 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR548I3-201ENST00000408378 149 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR548I1-201ENST00000408810 149 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 RNU6-394P-201ENST00000410735 107 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 RPL39P39-201ENST00000455840 151 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA18.4-201ENST00000516440 124 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORA18.7-201ENST00000516910 131 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR4498-201ENST00000577599 66 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR4255-201ENST00000579351 72 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 MIR6844-201ENST00000637122 62 ntBASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-34-201ENST00000362441 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-12-201ENST00000362583 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-29-201ENST00000362834 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-9-201ENST00000362912 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-21-201ENST00000362963 81 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-14-201ENST00000363090 81 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-13-201ENST00000363358 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-41-201ENST00000363608 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-11-201ENST00000363616 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-5-201ENST00000363633 82 ntBASIC1.78□□□□□ -2.12
PCDHGA3Q9Y5H0 SNORD115-39-201ENST00000363694 82 ntBASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms