Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC097639.2-201ENST00000603159 172 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 AL365434.2-201ENST00000607979 234 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 AL353997.5-201ENST00000618886 171 ntBASIC1.3□□□□□ -2.2
SIX2Q9NPC8 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.3□□□□□ -2.2
SIX2Q9NPC8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.3□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 SNORA7.1-201ENST00000363750 139 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 SNORA2.2-201ENST00000365473 135 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 SNORD38C-201ENST00000384381 69 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 MIR15B-201ENST00000385045 98 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 MIR516B2-201ENST00000385190 85 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 RNU2-64P-201ENST00000411315 191 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 AP1B1P2-201ENST00000416196 106 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 AL121914.1-201ENST00000450188 156 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 RNU1-98P-201ENST00000458992 160 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 RNU6-1219P-201ENST00000516143 112 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 RNA5SP153-201ENST00000516498 76 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 RNU6-197P-201ENST00000516680 100 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 MRPS18CP4-201ENST00000535821 231 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 AC090049.2-201ENST00000550377 109 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 AL160236.1-201ENST00000556317 195 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 MIR4524B-201ENST00000581569 115 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 MIR3668-201ENST00000582138 75 ntBASIC1.29□□□□□ -2.2
SIX2Q9NPC8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
SIX2Q9NPC8 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
SIX2Q9NPC8 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.28□□□□□ -2.2
SIX2Q9NPC8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 RNU6-682P-201ENST00000363843 106 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 SNORA26-201ENST00000391286 122 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 RNU2-70P-201ENST00000410718 179 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 BTF3P4-201ENST00000418852 495 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 AC027119.1-201ENST00000440877 241 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 AC079140.2-201ENST00000506193 142 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 RNU6-182P-201ENST00000516970 105 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 RNU6-365P-201ENST00000517113 106 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 FAM106DP-201ENST00000586416 501 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.28□□□□□ -2.2
SIX2Q9NPC8 SNORD24-201ENST00000383884 75 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 MIR136-201ENST00000385207 82 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 RNU6-907P-201ENST00000390924 102 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 MIR548O-201ENST00000408583 114 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 RNU6-237P-201ENST00000515985 71 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 RNU6-830P-201ENST00000516353 107 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 RNU7-25P-201ENST00000516544 62 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 RNU6-861P-201ENST00000516745 106 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 AC019176.1-201ENST00000518519 225 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 MIR4422-201ENST00000581938 83 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.27□□□□□ -2.21
SIX2Q9NPC8 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
SIX2Q9NPC8 Y_RNA.23-201ENST00000362496 106 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 Y_RNA.240-201ENST00000364469 95 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU6-312P-201ENST00000364629 107 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 SNORD61-201ENST00000384252 73 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 MIR548A2-201ENST00000384956 97 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 SNORD41-201ENST00000386967 70 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU1-78P-201ENST00000391248 165 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 AL451046.2-201ENST00000403074 277 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 SNORA79-201ENST00000408376 140 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU6-322P-201ENST00000516010 103 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU6-504P-201ENST00000516568 104 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU6-922P-201ENST00000516753 99 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 AL513534.2-201ENST00000603836 250 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 AC015726.2-201ENST00000620112 122 ntBASIC1.26□□□□□ -2.21
SIX2Q9NPC8 RNU6-888P-201ENST00000363010 101 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 RNU6-643P-201ENST00000384018 107 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 SNX2P2-201ENST00000424553 323 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 AC245517.4-201ENST00000448601 281 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 AC009474.2-201ENST00000451383 136 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 RNA5SP445-201ENST00000515889 115 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 RNU4-57P-201ENST00000515980 135 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 RNU6-970P-201ENST00000516312 107 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 AC007751.1-201ENST00000529260 376 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 MIR4431-201ENST00000579990 94 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 MIR3937-201ENST00000580135 106 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 MIR4285-201ENST00000581001 85 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 FTX_2.1-201ENST00000618816 94 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 AL353770.2-201ENST00000620024 78 ntBASIC1.25□□□□□ -2.21
SIX2Q9NPC8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
SIX2Q9NPC8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RNA5SP432-201ENST00000362480 116 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 MIR518F-201ENST00000384973 87 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RPS27P16-201ENST00000425758 201 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 SEPT7P4-201ENST00000437076 306 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RNU6-693P-201ENST00000516134 107 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RNU6-1270P-201ENST00000517128 108 ntBASIC1.24□□□□□ -2.21
SIX2Q9NPC8 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
SIX2Q9NPC8 RNU6-482P-201ENST00000391068 107 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.23□□□□□ -2.21
SIX2Q9NPC8 RNU6-955P-201ENST00000410497 104 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 RNU5E-9P-201ENST00000411164 104 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 AL591704.2-201ENST00000421658 181 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 SNORD123-201ENST00000459473 70 ntBASIC1.23□□□□□ -2.21
SIX2Q9NPC8 Y_RNA.662-201ENST00000516028 97 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms