Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 COX6CP14-201ENST00000469580 174 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 SCARNA8-201ENST00000515924 131 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 RNU6-830P-201ENST00000516353 107 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 RNU7-149P-201ENST00000516739 59 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 RNU6-111P-201ENST00000517179 105 ntBASIC1.37□□□□□ -2.19
USP44Q9H0E7 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
USP44Q9H0E7 RNU6-268P-201ENST00000364174 107 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 SNORA20.1-201ENST00000364790 130 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 MIR499A-201ENST00000384903 122 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 Y_RNA.587-201ENST00000391210 103 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 SNORD77.4-201ENST00000516158 81 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 RNY3P16-201ENST00000516338 101 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 SNORA74.3-201ENST00000517108 154 ntBASIC1.36□□□□□ -2.19
USP44Q9H0E7 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
USP44Q9H0E7 MIR96-201ENST00000362288 78 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 MT-TT-201ENST00000387460 66 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 MIR1276-201ENST00000408707 83 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.35□□□□□ -2.19
USP44Q9H0E7 RNU7-43P-201ENST00000516554 64 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 RNU6-453P-201ENST00000516819 85 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 RNU6-165P-201ENST00000517170 99 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.35□□□□□ -2.19
USP44Q9H0E7 SNORD114-21-201ENST00000606412 72 ntBASIC1.35□□□□□ -2.19
USP44Q9H0E7 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
USP44Q9H0E7 MIR26B-201ENST00000362251 77 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 Y_RNA.262-201ENST00000364641 102 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 RNU6-1138P-201ENST00000365359 106 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 MIR4295-201ENST00000585286 85 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 AC006441.5-201ENST00000612680 209 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 Pinc.1-201ENST00000616452 154 ntBASIC1.34□□□□□ -2.19
USP44Q9H0E7 RNY1-201ENST00000364228 113 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 SNORA25.8-201ENST00000364831 128 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 RNU6-1067P-201ENST00000384752 107 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 MIR150-201ENST00000385048 84 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 SNORD12-201ENST00000391002 90 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 RNU6-381P-201ENST00000391259 108 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 Y_RNA.626-201ENST00000411288 95 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 AL133373.1-201ENST00000497098 94 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 RNU4-71P-201ENST00000516258 113 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 RNA5SP102-201ENST00000516865 106 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 MIR4662B-201ENST00000579498 81 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 MIR6767-201ENST00000637302 66 ntBASIC1.33□□□□□ -2.2
USP44Q9H0E7 Y_RNA.308-201ENST00000365043 101 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 RNU4-17P-201ENST00000365598 141 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 Y_RNA.401-201ENST00000383965 117 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 Y_RNA.486-201ENST00000384398 107 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 MIR618-201ENST00000385287 98 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 MIR616-201ENST00000385293 97 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 AC087343.1-201ENST00000477341 475 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.32□□□□□ -2.2
USP44Q9H0E7 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.32□□□□□ -2.2
USP44Q9H0E7 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
USP44Q9H0E7 Y_RNA.188-201ENST00000363952 111 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 SNORA70.7-201ENST00000384159 133 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 AL606845.1-201ENST00000404881 255 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 Y_RNA.618-201ENST00000410949 107 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 AC245047.7-201ENST00000440265 293 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 RN7SKP164-201ENST00000516138 266 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 SNORD111.1-201ENST00000516421 86 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 SNORA18.7-201ENST00000516910 131 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 RNU6-1271P-201ENST00000517049 105 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 SNORA70.22-201ENST00000517160 124 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 AL391903.3-201ENST00000612158 163 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 MIR6504-201ENST00000613520 61 ntBASIC1.31□□□□□ -2.2
USP44Q9H0E7 RNU6-379P-201ENST00000363813 104 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 Y_RNA.370-201ENST00000365589 108 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 Y_RNA.489-201ENST00000384410 101 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 MT-TG-201ENST00000387429 68 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 RNU6-493P-201ENST00000391321 108 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.3□□□□□ -2.2
USP44Q9H0E7 SNRPGP8-201ENST00000454064 226 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 SNORD123-201ENST00000459473 70 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.3□□□□□ -2.2
USP44Q9H0E7 Y_RNA.666-201ENST00000516187 112 ntBASIC1.3□□□□□ -2.2
USP44Q9H0E7 SNORD114-27-201ENST00000363766 70 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNU6-923P-201ENST00000364753 107 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 SNORA1.2-201ENST00000365189 134 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNU6-484P-201ENST00000384016 107 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNY3P5-201ENST00000384127 102 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 SNORA25-201ENST00000384384 134 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 MIR520C-201ENST00000385005 87 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNU6-1228P-201ENST00000391014 107 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 MIR1285-1-201ENST00000408593 84 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 Y_RNA.622-201ENST00000411091 108 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNU6-561P-201ENST00000516222 102 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNU6-947P-201ENST00000516264 106 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 MIR4308-201ENST00000580634 81 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 AL096861.1-201ENST00000610899 123 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 AC015726.2-201ENST00000620112 122 ntBASIC1.29□□□□□ -2.2
USP44Q9H0E7 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
USP44Q9H0E7 RNA5SP48-201ENST00000363969 126 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 Y_RNA.199-201ENST00000364014 102 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 SNORA80D-201ENST00000384488 135 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 RNU6-939P-201ENST00000384634 107 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 RNU2-55P-201ENST00000411146 174 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 snoU13.25-201ENST00000458945 104 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 SNORA31.2-201ENST00000516019 134 ntBASIC1.28□□□□□ -2.2
USP44Q9H0E7 RNU7-25P-201ENST00000516544 62 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 296.5 ms