Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 RNU6-128P-201ENST00000383976 107 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 MIR204-201ENST00000385200 110 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 MIR190B-201ENST00000401119 79 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 SNORD12B-201ENST00000410433 91 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 RNU6-1133P-201ENST00000410963 100 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 MTND3P16-201ENST00000452205 344 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 RPL30P15-201ENST00000457129 321 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 IGKV1-22-201ENST00000524313 326 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 AC060780.3-201ENST00000589464 80 ntBASIC-1.18□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.364-201ENST00000365532 101 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 SNORA40.4-201ENST00000390971 128 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 SNORA40.5-201ENST00000391061 128 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 AL590004.1-201ENST00000405321 300 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 SNORD11-201ENST00000459124 84 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 UBE2V1P12-201ENST00000503954 474 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 SNORD36C-201ENST00000516733 66 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 RNA5SP480-201ENST00000516840 109 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 AC060788.1-201ENST00000521318 469 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 RNU6-86P-201ENST00000606534 107 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 AC011373.1-201ENST00000607270 237 ntBASIC-1.19□□□□□ -2.6
VPS25Q9BRG1 RNA5SP403-201ENST00000363598 108 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 MIR9-2-201ENST00000384838 87 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 SNORA26.6-201ENST00000391256 115 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 RNU4-55P-201ENST00000410731 137 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 MTCO2P19-201ENST00000427513 598 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 AC244505.6-201ENST00000452829 130 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 SCARNA17-201ENST00000516183 144 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 DEFB131E-201ENST00000532329 154 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 AC127455.1-201ENST00000565496 145 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 AP003357.1-201ENST00000604497 148 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 AC018462.2-201ENST00000605375 395 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 MIR6717-201ENST00000622747 73 ntBASIC-1.2□□□□□ -2.6
VPS25Q9BRG1 RNU6-1214P-201ENST00000363650 109 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 SNORD115-28-201ENST00000363931 81 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 RNU4-50P-201ENST00000364361 141 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 SNORD56B-201ENST00000384713 71 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 Z95118.1-201ENST00000421372 247 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 RNU6-155P-201ENST00000516347 100 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 RNU7-116P-201ENST00000516940 62 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 MIR4423-201ENST00000580922 80 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 AC245884.10-201ENST00000597355 337 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 AL360085.1-201ENST00000604713 532 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 AC018645.2-201ENST00000609151 472 ntBASIC-1.21□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.1-201ENST00000352915 104 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 SNORD95.1-201ENST00000364099 68 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 Y_RNA.310-201ENST00000365063 113 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 MIR626-201ENST00000385032 94 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 MIR514A2-201ENST00000385131 88 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 MIR514A3-201ENST00000385132 88 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 MTND3P21-201ENST00000433774 331 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 SNORD38.3-201ENST00000516599 73 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 RNU6-881P-201ENST00000516813 102 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 AC097520.1-201ENST00000624435 385 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 AC007494.3-201ENST00000624660 743 ntBASIC-1.22□□□□□ -2.6
VPS25Q9BRG1 MIR342-201ENST00000362212 99 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.37-201ENST00000362606 108 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 SNORD114-25-201ENST00000363742 72 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 RNU6-1336P-201ENST00000383886 109 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 RNU6-949P-201ENST00000384040 107 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 SNORD77.3-201ENST00000391113 65 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 SPINT5P-201ENST00000448174 155 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 RNU6-261P-201ENST00000459506 102 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 AC021146.6-201ENST00000514659 117 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 RNU7-115P-201ENST00000516433 55 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 SNORA27.4-201ENST00000516650 95 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 RNU6-175P-201ENST00000516896 107 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 ZNF519P2-201ENST00000557032 169 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 AC122108.2-201ENST00000611946 526 ntBASIC-1.23□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.146-201ENST00000363549 102 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.341-201ENST00000365341 102 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.446-201ENST00000384178 104 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.490-201ENST00000384413 102 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.555-201ENST00000384673 110 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 AF228730.4-201ENST00000421457 183 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 FCF1P4-201ENST00000448326 183 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 AC023449.1-201ENST00000454464 154 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.648-201ENST00000459455 110 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 MIR5701-3-201ENST00000578890 82 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 MIR5701-1-201ENST00000585138 82 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 MIR5701-2-201ENST00000615634 82 ntBASIC-1.24□□□□□ -2.61
VPS25Q9BRG1 RNU6-653P-201ENST00000363074 106 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 Y_RNA.221-201ENST00000364248 96 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 MIR635-201ENST00000384830 98 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 MTATP6P23-201ENST00000440153 476 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 RNU6-998P-201ENST00000515894 101 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 RNU6-470P-201ENST00000515954 104 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 RNU6-759P-201ENST00000516740 103 ntBASIC-1.25□□□□□ -2.61
VPS25Q9BRG1 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.25□□□□□ -2.61
Retrieved 100 of 98,524 protein–RNA pairs in 257.9 ms