Protein–RNA interactions for Protein: Q96MW1

CCDC43, Coiled-coil domain-containing protein 43, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43Q96MW1 AC022140.2-201ENST00000623500 188 ntBASIC0.39□□□□□ -2.35
CCDC43Q96MW1 MIR548O-201ENST00000408583 114 ntBASIC0.38□□□□□ -2.35
CCDC43Q96MW1 AC236972.2-201ENST00000434979 310 ntBASIC0.38□□□□□ -2.35
CCDC43Q96MW1 RNU6-976P-201ENST00000516086 111 ntBASIC0.38□□□□□ -2.35
CCDC43Q96MW1 AC134878.1-201ENST00000619901 243 ntBASIC0.38□□□□□ -2.35
CCDC43Q96MW1 MIRLET7D-201ENST00000362263 87 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.241-201ENST00000364470 117 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.37□□□□□ -2.35
CCDC43Q96MW1 RNU7-56P-201ENST00000458744 62 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 RNU7-62P-201ENST00000458856 62 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 FGF7P4-201ENST00000509595 295 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 RNU6-1170P-201ENST00000515974 106 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 RNU7-149P-201ENST00000516739 59 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 RNU6-958P-201ENST00000516995 106 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 AC040926.1-201ENST00000530195 238 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.37□□□□□ -2.35
CCDC43Q96MW1 AC006157.1-201ENST00000611750 366 ntBASIC0.37□□□□□ -2.35
CCDC43Q96MW1 SNORA72.1-201ENST00000363485 129 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU6-1205P-201ENST00000363625 106 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU4-45P-201ENST00000365469 141 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.418-201ENST00000384029 102 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 SNORA24-201ENST00000384096 131 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU6-679P-201ENST00000391003 106 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU6-383P-201ENST00000410864 94 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 Y_RNA.666-201ENST00000516187 112 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNA5SP134-201ENST00000516492 96 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU6-1046P-201ENST00000516538 107 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RN7SL793P-201ENST00000583259 296 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 AL355297.3-201ENST00000604082 446 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 uc_338.6-201ENST00000613544 171 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 MIR7111-201ENST00000619751 72 ntBASIC0.36□□□□□ -2.35
CCDC43Q96MW1 RNU6-144P-201ENST00000383951 107 ntBASIC0.35□□□□□ -2.35
CCDC43Q96MW1 RNY1P4-201ENST00000384595 115 ntBASIC0.35□□□□□ -2.35
CCDC43Q96MW1 RNU6-763P-201ENST00000390865 106 ntBASIC0.35□□□□□ -2.35
CCDC43Q96MW1 AC091959.1-201ENST00000495857 238 ntBASIC0.35□□□□□ -2.35
CCDC43Q96MW1 RNU6-764P-201ENST00000516396 105 ntBASIC0.35□□□□□ -2.35
CCDC43Q96MW1 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.35□□□□□ -2.35
CCDC43Q96MW1 SNORD115-34-201ENST00000362441 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-12-201ENST00000362583 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.36-201ENST00000362602 112 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-29-201ENST00000362834 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-9-201ENST00000362912 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-21-201ENST00000362963 81 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-14-201ENST00000363090 81 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-13-201ENST00000363358 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD113-8-201ENST00000363497 74 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-41-201ENST00000363608 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-11-201ENST00000363616 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-5-201ENST00000363633 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-39-201ENST00000363694 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-4-201ENST00000363810 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-16-201ENST00000363887 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-6-201ENST00000363942 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.222-201ENST00000364264 102 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-42-201ENST00000364273 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-15-201ENST00000364809 81 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-1-201ENST00000364961 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-26-201ENST00000365067 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-10-201ENST00000365073 81 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-43-201ENST00000365503 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-36-201ENST00000365629 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.529-201ENST00000384586 119 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.34□□□□□ -2.36
CCDC43Q96MW1 BTF3P11-201ENST00000426582 477 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 AC002350.1-201ENST00000490759 375 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 AL049861.1-201ENST00000603130 150 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 SNORD115-40-201ENST00000606510 82 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 AC092634.7-201ENST00000621022 103 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 AC010487.4-201ENST00000637027 61 ntBASIC0.34□□□□□ -2.36
CCDC43Q96MW1 RNU6-1283P-201ENST00000365314 105 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.393-201ENST00000383936 102 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 SNORD38B-201ENST00000384690 67 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 MIR938-201ENST00000401216 83 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC0.33□□□□□ -2.36
CCDC43Q96MW1 MRPS35P2-201ENST00000508242 191 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 SNORD38B-202ENST00000625943 69 ntBASIC0.33□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.58-201ENST00000362807 102 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.154-201ENST00000363624 102 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 RNY3P1-201ENST00000365085 102 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.356-201ENST00000365475 113 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.602-201ENST00000410535 92 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 SNORA18.4-201ENST00000516440 124 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 RNU6-875P-201ENST00000516488 106 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 AC007751.1-201ENST00000529260 376 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 MIR6740-201ENST00000618268 113 ntBASIC0.32□□□□□ -2.36
CCDC43Q96MW1 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
CCDC43Q96MW1 AC010332.2-201ENST00000613083 1904 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 AC090625.1-201ENST00000357130 210 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.315-201ENST00000365117 102 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 RNU6-102P-201ENST00000384485 104 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 RNU6-913P-201ENST00000390913 95 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC0.31□□□□□ -2.36
CCDC43Q96MW1 C8orf59P2-201ENST00000603441 271 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 AL021707.8-201ENST00000609428 183 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 MIR8055-201ENST00000610739 97 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 AC007485.1-201ENST00000616755 206 ntBASIC0.31□□□□□ -2.36
CCDC43Q96MW1 MIR103A1-201ENST00000362165 78 ntBASIC0.3□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.14-201ENST00000362415 103 ntBASIC0.3□□□□□ -2.36
CCDC43Q96MW1 Y_RNA.136-201ENST00000363444 102 ntBASIC0.3□□□□□ -2.36
CCDC43Q96MW1 SNORD114-26-201ENST00000363543 72 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 256.3 ms