Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.92□□□□□ -2.26
CCDC63Q8NA47 Y_RNA.789-201ENST00000622480 102 ntBASIC0.92□□□□□ -2.26
CCDC63Q8NA47 Y_RNA.140-201ENST00000363474 103 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 SNORD114-24-201ENST00000365029 72 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 Y_RNA.396-201ENST00000383949 103 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 SNORA8.3-201ENST00000384679 139 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 Y_RNA.587-201ENST00000391210 103 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC63Q8NA47 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC0.91□□□□□ -2.26
CCDC63Q8NA47 MIR4524B-201ENST00000581569 115 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 AC131055.1-201ENST00000584626 316 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 MIR4791-201ENST00000607666 84 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 MIR6516-201ENST00000630554 81 ntBASIC0.91□□□□□ -2.26
CCDC63Q8NA47 RNU6-654P-201ENST00000364373 107 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 RNU1-36P-201ENST00000365130 165 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.370-201ENST00000365589 108 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.494-201ENST00000384432 111 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.537-201ENST00000384626 109 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 MIR548A2-201ENST00000384956 97 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 MIR1302-6-201ENST00000408466 90 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 AC005840.1-201ENST00000498412 377 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 RNU11-2P-201ENST00000516898 142 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 AC023827.1-201ENST00000569247 97 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 MIR548AO-201ENST00000579992 96 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 MIR4282-201ENST00000583613 67 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 MTND1P7-201ENST00000632801 297 ntBASIC0.9□□□□□ -2.27
CCDC63Q8NA47 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.89□□□□□ -2.27
CCDC63Q8NA47 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.89□□□□□ -2.27
CCDC63Q8NA47 SNORA51.10-201ENST00000384418 136 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 AL358176.2-201ENST00000425769 204 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 AC109810.1-201ENST00000534066 224 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 MIR4662B-201ENST00000579498 81 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 AC104984.5-201ENST00000586878 94 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC0.89□□□□□ -2.27
CCDC63Q8NA47 SNORD114-2-201ENST00000363953 78 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 snoU2_19.4-201ENST00000364329 80 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 SNORA1.2-201ENST00000365189 134 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 MIR518F-201ENST00000384973 87 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 MIR146A-201ENST00000385201 99 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 RNU6-938P-201ENST00000411285 103 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 COX6CP14-201ENST00000469580 174 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 AC036111.3-201ENST00000526389 112 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 MIR4643-201ENST00000577473 78 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 AC012433.1-201ENST00000588916 398 ntBASIC0.88□□□□□ -2.27
CCDC63Q8NA47 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.88□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.122-201ENST00000363331 96 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.176-201ENST00000363815 109 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 RNU6-484P-201ENST00000384016 107 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 SNORA24-201ENST00000384096 131 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 SNORD61-201ENST00000384252 73 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 MT-TT-201ENST00000387460 66 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 RNU6-847P-201ENST00000411115 108 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 PDCD5P2-201ENST00000507570 312 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 SCARNA8-201ENST00000515924 131 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 AL360085.1-201ENST00000604713 532 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 AC091895.1-201ENST00000624494 256 ntBASIC0.87□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.47-201ENST00000362697 108 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.66-201ENST00000362862 102 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 SNORD115-28-201ENST00000363931 81 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.304-201ENST00000365011 112 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 SNORD24-201ENST00000383884 75 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.459-201ENST00000384251 102 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 MIR942-201ENST00000401111 86 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 Y_RNA.590-201ENST00000410140 107 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 RNA5SP95-201ENST00000410319 137 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 ACA64.5-201ENST00000516207 127 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 RNA5SP255-201ENST00000516370 107 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 RNU6-453P-201ENST00000516819 85 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 AC106800.4-201ENST00000614905 153 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 MIR6715A-201ENST00000615929 79 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 AC243994.1-201ENST00000618627 109 ntBASIC0.86□□□□□ -2.27
CCDC63Q8NA47 SNORD115-34-201ENST00000362441 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-12-201ENST00000362583 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-29-201ENST00000362834 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-9-201ENST00000362912 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-21-201ENST00000362963 81 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNU6-888P-201ENST00000363010 101 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-14-201ENST00000363090 81 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNU6-1309P-201ENST00000363305 108 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-13-201ENST00000363358 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-41-201ENST00000363608 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-11-201ENST00000363616 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-5-201ENST00000363633 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-39-201ENST00000363694 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-4-201ENST00000363810 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-16-201ENST00000363887 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-6-201ENST00000363942 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNA5SP99-201ENST00000364020 114 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-42-201ENST00000364273 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-15-201ENST00000364809 81 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-1-201ENST00000364961 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-26-201ENST00000365067 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-10-201ENST00000365073 81 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-43-201ENST00000365503 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 SNORD115-36-201ENST00000365629 82 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNU6-1067P-201ENST00000384752 107 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 RNU6-613P-201ENST00000410412 108 ntBASIC0.85□□□□□ -2.27
CCDC63Q8NA47 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC0.85□□□□□ -2.27
CCDC63Q8NA47 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC0.85□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 328.1 ms