Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 Y_RNA.602-201ENST00000410535 92 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 HMGN1P33-201ENST00000432945 451 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 FGF7P4-201ENST00000509595 295 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-507P-201ENST00000516045 100 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-976P-201ENST00000516086 111 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-875P-201ENST00000516488 106 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNA5SP134-201ENST00000516492 96 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 RNU6-1007P-201ENST00000516586 107 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 AC008608.1-201ENST00000603910 127 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 AC010332.2-201ENST00000613083 1904 ntBASIC0.3□□□□□ -2.36
CCDC50Q8IVM0 MIR103A1-201ENST00000362165 78 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 RNU6-1205P-201ENST00000363625 106 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.579-201ENST00000390939 94 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 MIR936-201ENST00000401264 98 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 HSPE1P25-201ENST00000455484 251 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.637-201ENST00000459424 114 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 RNU6-397P-201ENST00000516226 104 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 RNA5SP220-201ENST00000516298 104 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 MIR4711-201ENST00000578274 70 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 AC112487.2-201ENST00000637950 304 ntBASIC0.29□□□□□ -2.36
CCDC50Q8IVM0 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 RNU6-1248P-201ENST00000391096 64 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 RNA5SP193-201ENST00000410353 107 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 RNU6-938P-201ENST00000411285 103 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 AC107297.1-201ENST00000459991 176 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 SNORA18.4-201ENST00000516440 124 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.713-201ENST00000517013 96 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 AL021707.8-201ENST00000609428 183 ntBASIC0.28□□□□□ -2.36
CCDC50Q8IVM0 Y_RNA.486-201ENST00000384398 107 ntBASIC0.27□□□□□ -2.37
CCDC50Q8IVM0 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC50Q8IVM0 AC092634.7-201ENST00000621022 103 ntBASIC0.27□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-34-201ENST00000362441 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-12-201ENST00000362583 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-29-201ENST00000362834 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-9-201ENST00000362912 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-21-201ENST00000362963 81 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-14-201ENST00000363090 81 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-13-201ENST00000363358 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-41-201ENST00000363608 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-11-201ENST00000363616 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-5-201ENST00000363633 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-39-201ENST00000363694 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-4-201ENST00000363810 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-16-201ENST00000363887 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-6-201ENST00000363942 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-42-201ENST00000364273 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 RNA5SP517-201ENST00000364724 117 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-15-201ENST00000364809 81 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-1-201ENST00000364961 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-26-201ENST00000365067 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-10-201ENST00000365073 81 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-43-201ENST00000365503 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-36-201ENST00000365629 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 VTRNA1-3-201ENST00000365645 89 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 RNU6-342P-201ENST00000384521 104 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.526-201ENST00000384572 110 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 MIR938-201ENST00000401216 83 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 MIR1287-201ENST00000408492 90 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 MTCO1P5-201ENST00000433573 344 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 AL355297.3-201ENST00000604082 446 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-40-201ENST00000606510 82 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 MIR8055-201ENST00000610739 97 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 AC122108.2-201ENST00000611946 526 ntBASIC0.26□□□□□ -2.37
CCDC50Q8IVM0 SNORD115-28-201ENST00000363931 81 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.197-201ENST00000364004 102 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.226-201ENST00000364337 114 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.238-201ENST00000364441 102 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.242-201ENST00000364473 110 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 MIR588-201ENST00000384900 83 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 AC023449.1-201ENST00000454464 154 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.715-201ENST00000517082 110 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 C8orf59P2-201ENST00000603441 271 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 AP000942.4-201ENST00000604811 241 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 MIR376A1-201ENST00000616574 68 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 AC013791.1-201ENST00000616619 62 ntBASIC0.25□□□□□ -2.37
CCDC50Q8IVM0 RNU6-1309P-201ENST00000363305 108 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.136-201ENST00000363444 102 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 RNU6-144P-201ENST00000383951 107 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 SNORD38B-201ENST00000384690 67 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.569-201ENST00000384749 103 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR518F-201ENST00000384973 87 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR216A-201ENST00000385063 110 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR1302-11-201ENST00000408051 138 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR1302-9-201ENST00000408365 138 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 MIR1302-10-201ENST00000408734 138 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 RNU6-1190P-201ENST00000410811 104 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 RNU7-102P-201ENST00000458948 62 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 Y_RNA.639-201ENST00000458981 102 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 AC108740.1-201ENST00000498629 225 ntBASIC0.24□□□□□ -2.37
CCDC50Q8IVM0 SNORA25.12-201ENST00000516202 82 ntBASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 197.4 ms