Protein–RNA interactions for Protein: Q7Z739

YTHDF3, YTH domain-containing family protein 3, humanhuman

Known RBP Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDF3Q7Z739 SNORD58C-201ENST00000365223 64 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 MIR1283-2-201ENST00000408621 87 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 RNA5SP247-201ENST00000411181 105 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AC245047.3-201ENST00000429428 127 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 RNU6-781P-201ENST00000516377 101 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 IGKV1-22-201ENST00000524313 326 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AC005786.1-201ENST00000588553 154 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AC108081.1-201ENST00000604358 221 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AL022345.2-201ENST00000606307 135 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 AC006441.5-201ENST00000612680 209 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 MIR6129-201ENST00000616087 109 ntBASIC1.91□□□□□ -2.1
YTHDF3Q7Z739 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.140-201ENST00000363474 103 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.338-201ENST00000365320 114 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 SNORD18B-201ENST00000365659 72 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 MIR29C-201ENST00000385231 88 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 RNY4P18-201ENST00000391107 89 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 RPL31P63-201ENST00000422565 375 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 SNORD33.1-201ENST00000516213 88 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 SNORA31.10-201ENST00000516482 106 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 RNA5SP137-201ENST00000516833 135 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 IGHVIII-67-2-201ENST00000519849 88 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 AC084364.2-201ENST00000546924 395 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 MIR219B-201ENST00000637023 88 ntBASIC1.9□□□□□ -2.11
YTHDF3Q7Z739 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 AL391516.1-201ENST00000554380 2449 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 RNU6-268P-201ENST00000364174 107 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 RNU6-647P-201ENST00000364243 107 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 RNU6-153P-201ENST00000364422 104 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 SNORA67.3-201ENST00000384366 140 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 MIR597-201ENST00000384968 97 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 MIR17-201ENST00000385012 84 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 RNA5SP482-201ENST00000391269 118 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 MIR548O-201ENST00000408583 114 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 RNU6-1149P-201ENST00000516810 97 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.714-201ENST00000517065 90 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 MIR8054-201ENST00000620877 86 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 U6.95-201ENST00000636931 70 ntBASIC1.89□□□□□ -2.11
YTHDF3Q7Z739 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 AL442644.1-201ENST00000454390 3105 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 MIRLET7C-201ENST00000362160 84 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.242-201ENST00000364473 110 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RN7SKP19-201ENST00000516016 252 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU6-589P-201ENST00000516485 107 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU6-1061P-201ENST00000516530 99 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU7-25P-201ENST00000516544 62 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 SNORD45.4-201ENST00000516629 73 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU6-295P-201ENST00000516901 104 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 AC133485.4-201ENST00000561835 220 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 AC138907.4-201ENST00000570107 226 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 MIR5197-201ENST00000583721 112 ntBASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
YTHDF3Q7Z739 RNU6-1019P-201ENST00000364424 107 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 RNU6-442P-201ENST00000383968 104 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.547-201ENST00000384654 119 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 RNU6-440P-201ENST00000390882 105 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 RNU5E-3P-201ENST00000515913 68 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 RNU7-28P-201ENST00000516759 62 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.709-201ENST00000516952 92 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 MIR3126-201ENST00000577443 74 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 MIR5094-201ENST00000578766 85 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.87□□□□□ -2.11
YTHDF3Q7Z739 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 SNORA63.4-201ENST00000362763 126 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.164-201ENST00000363709 102 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 SNORD14E-201ENST00000364009 85 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 snoU2-30.1-201ENST00000365012 70 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 RNU6-938P-201ENST00000411285 103 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 HSPE1P9-201ENST00000440046 311 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 MTATP6P21-201ENST00000440681 189 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 STAG3L5P-204ENST00000443759 179 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 RNA5SP233-201ENST00000459153 113 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 RNU6-1116P-201ENST00000517269 99 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 MTND5P34-201ENST00000568888 325 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 AC069114.2-201ENST00000604699 304 ntBASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
YTHDF3Q7Z739 RNU6-1084P-201ENST00000362498 107 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 SNORA63D-201ENST00000364359 132 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 SNORA16.1-201ENST00000364597 132 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.265-201ENST00000364677 108 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 Y_RNA.336-201ENST00000365307 109 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 MIR518A2-201ENST00000384966 87 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 AL023284.1-201ENST00000403956 276 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 PDCD5P2-201ENST00000507570 312 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 RNVU1-2-201ENST00000516326 135 ntBASIC1.85□□□□□ -2.11
YTHDF3Q7Z739 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.85□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 226.9 ms