Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
RNF111Q6ZNA4 AC005336.3-201ENST00000623833 2679 ntBASIC2.4□□□□□ -2.02
RNF111Q6ZNA4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.02
RNF111Q6ZNA4 MIR302B-201ENST00000362188 73 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 RNU6-905P-201ENST00000384434 107 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 MIR1267-201ENST00000408723 78 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 AL035398.1-201ENST00000430869 322 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 AC093850.1-201ENST00000454121 251 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 RNU7-34P-201ENST00000459394 64 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 RNU6-998P-201ENST00000515894 101 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP437-201ENST00000517249 129 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 AC068339.1-201ENST00000526965 141 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 MIR3683-201ENST00000580847 82 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 MIR6852-201ENST00000621699 66 ntBASIC2.4□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-34-201ENST00000362441 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-12-201ENST00000362583 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-29-201ENST00000362834 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-9-201ENST00000362912 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-21-201ENST00000362963 81 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-14-201ENST00000363090 81 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-13-201ENST00000363358 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-41-201ENST00000363608 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-11-201ENST00000363616 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-5-201ENST00000363633 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-39-201ENST00000363694 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-4-201ENST00000363810 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-16-201ENST00000363887 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-6-201ENST00000363942 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-42-201ENST00000364273 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-15-201ENST00000364809 81 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-1-201ENST00000364961 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-26-201ENST00000365067 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-10-201ENST00000365073 81 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 Y_RNA.348-201ENST00000365403 103 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-43-201ENST00000365503 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-36-201ENST00000365629 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 MIR548D2-201ENST00000384955 97 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP465-201ENST00000391195 109 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 AC108938.1-201ENST00000451204 136 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 RNU7-96P-201ENST00000459535 64 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 RPL23AP63-201ENST00000498752 471 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORA31.4-201ENST00000516049 129 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 IGLV3-17-201ENST00000519099 244 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 MIR3163-201ENST00000581592 73 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SNORD115-40-201ENST00000606510 82 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 AP001318.4-201ENST00000616637 121 ntBASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.39□□□□□ -2.03
RNF111Q6ZNA4 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 RNU1-51P-201ENST00000365345 176 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 MIR520A-201ENST00000384862 85 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 SNORA48.1-201ENST00000390879 135 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 HMGN2P39-201ENST00000398005 273 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 RNU2-11P-201ENST00000459191 187 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 SCARNA16.3-201ENST00000516595 184 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 RNU7-6P-201ENST00000516845 62 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 MIR5009-201ENST00000578736 100 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 MIR3162-201ENST00000581818 82 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 MIR4298-201ENST00000584380 73 ntBASIC2.38□□□□□ -2.03
RNF111Q6ZNA4 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 RNU6-640P-201ENST00000363693 105 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 RNU6-1113P-201ENST00000384348 107 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 SNORA19.1-201ENST00000410656 129 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP144-201ENST00000410846 116 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 RNA5SP501-201ENST00000410990 112 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 RNU7-45P-201ENST00000459460 63 ntBASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.37□□□□□ -2.03
RNF111Q6ZNA4 AP000648.3-201ENST00000623539 4507 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 Y_RNA.369-201ENST00000365568 117 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 Y_RNA.500-201ENST00000384466 111 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 MIR452-201ENST00000385020 85 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 AL512326.2-201ENST00000426359 151 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 UBE2DNL-203ENST00000474922 222 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 SNORA72.7-201ENST00000516349 94 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 RPPH1-2P-201ENST00000516688 293 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 AC141557.1-201ENST00000540982 400 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 SUB1P4-201ENST00000566062 339 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 MIR4446-201ENST00000578505 67 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 AC021506.2-201ENST00000612354 169 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 MIR6817-201ENST00000615588 66 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 AC021613.1-201ENST00000623880 111 ntBASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
RNF111Q6ZNA4 RNU6-112P-201ENST00000363599 104 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 MIR590-201ENST00000385008 97 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 MIR27B-201ENST00000385129 97 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 AL022718.1-201ENST00000412004 84 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 AC107297.1-201ENST00000459991 176 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 UBL5P3-201ENST00000475112 231 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 RNU6-109P-201ENST00000516364 107 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 RNU6-184P-201ENST00000516514 107 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 MIR4709-201ENST00000577272 72 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 MIR4513-201ENST00000581077 86 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 MIR4672-201ENST00000583126 81 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 AL513534.2-201ENST00000603836 250 ntBASIC2.35□□□□□ -2.03
RNF111Q6ZNA4 AC092881.1-201ENST00000638218 2733 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 316.5 ms