Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 RNU6-1116P-201ENST00000517269 99 ntBASIC2.22□□□□□ -2.05
KRT40Q6A162 AC006441.5-201ENST00000612680 209 ntBASIC2.22□□□□□ -2.05
KRT40Q6A162 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.22□□□□□ -2.05
KRT40Q6A162 ZNF355P-201ENST00000427301 3216 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNU6-235P-201ENST00000362644 107 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNU6-309P-201ENST00000364573 106 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 SNORA48.1-201ENST00000390879 135 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 SNORD77.3-201ENST00000391113 65 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNA5SP465-201ENST00000391195 109 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNA5SP482-201ENST00000391269 118 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNA5SP501-201ENST00000410990 112 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 SNRPGP13-201ENST00000442212 177 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 SNORD13-201ENST00000459299 104 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT40Q6A162 RNU6-693P-201ENST00000516134 107 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 RNA5SP236-201ENST00000516169 116 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 SNORD45.4-201ENST00000516629 73 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC2.21□□□□□ -2.06
KRT40Q6A162 MIR3121-201ENST00000579680 77 ntBASIC2.21□□□□□ -2.06
KRT40Q6A162 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.21□□□□□ -2.06
KRT40Q6A162 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
KRT40Q6A162 RNU6-268P-201ENST00000364174 107 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 Y_RNA.265-201ENST00000364677 108 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 SNORA25.9-201ENST00000365087 128 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 AF228730.3-201ENST00000436691 102 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 AC003989.2-201ENST00000440224 169 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.2□□□□□ -2.06
KRT40Q6A162 Y_RNA.651-201ENST00000459380 103 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 snoU13.18-201ENST00000459483 104 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 SNORA18.4-201ENST00000516440 124 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 RNU7-25P-201ENST00000516544 62 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 RNA5SP437-201ENST00000517249 129 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 SUB1P4-201ENST00000566062 339 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 MIR3935-201ENST00000583472 104 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.2□□□□□ -2.06
KRT40Q6A162 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KRT40Q6A162 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KRT40Q6A162 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
KRT40Q6A162 RNU6-661P-201ENST00000362409 107 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 RNU6-1292P-201ENST00000383856 107 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 RNU6-296P-201ENST00000384608 107 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 AL603914.1-201ENST00000401964 204 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 MIR548O-201ENST00000408583 114 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.19□□□□□ -2.06
KRT40Q6A162 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC2.19□□□□□ -2.06
KRT40Q6A162 RNU7-28P-201ENST00000516759 62 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 Y_RNA.714-201ENST00000517065 90 ntBASIC2.19□□□□□ -2.06
KRT40Q6A162 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC2.19□□□□□ -2.06
KRT40Q6A162 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
KRT40Q6A162 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRT40Q6A162 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KRT40Q6A162 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
KRT40Q6A162 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC2.18□□□□□ -2.06
KRT40Q6A162 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRT40Q6A162 Y_RNA.114-201ENST00000363265 113 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 snoU2-30.1-201ENST00000365012 70 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
KRT40Q6A162 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 Y_RNA.629-201ENST00000411368 105 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.18□□□□□ -2.06
KRT40Q6A162 AC079804.2-201ENST00000490376 200 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 TRMT112P2-201ENST00000512910 132 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 Y_RNA.690-201ENST00000516603 95 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 SCARNA15-202ENST00000516881 127 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 SNORA31.25-201ENST00000517242 134 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 AL442644.1-201ENST00000454390 3105 ntBASIC2.18□□□□□ -2.06
KRT40Q6A162 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
KRT40Q6A162 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.18□□□□□ -2.06
KRT40Q6A162 RNU6-1084P-201ENST00000362498 107 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 RNU6-112P-201ENST00000363599 104 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 SNORD14E-201ENST00000364009 85 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 RNA5SP190-201ENST00000365222 118 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 RNU6-442P-201ENST00000383968 104 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 Y_RNA.547-201ENST00000384654 119 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 Y_RNA.563-201ENST00000384707 108 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
KRT40Q6A162 AC019129.1-201ENST00000403786 261 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 SUMO2P12-201ENST00000405924 140 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 AL445685.2-201ENST00000422551 342 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 CALM2P4-201ENST00000430810 426 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 AL158147.1-201ENST00000443970 75 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 RPS27P21-201ENST00000486977 252 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 AC114811.1-201ENST00000507207 168 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 RNU6-772P-201ENST00000516042 105 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 Y_RNA.692-201ENST00000516627 105 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 Y_RNA.712-201ENST00000517011 92 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 IGHVIII-67-2-201ENST00000519849 88 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 AL359821.1-201ENST00000605519 182 ntBASIC2.17□□□□□ -2.06
KRT40Q6A162 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
KRT40Q6A162 SNORA40.5-201ENST00000391061 128 ntBASIC2.16□□□□□ -2.06
KRT40Q6A162 SNORD23.1-201ENST00000408212 104 ntBASIC2.16□□□□□ -2.06
KRT40Q6A162 RNA5SP489-201ENST00000410986 109 ntBASIC2.16□□□□□ -2.06
KRT40Q6A162 RNA5SP450-201ENST00000411206 102 ntBASIC2.16□□□□□ -2.06
KRT40Q6A162 RNU6-938P-201ENST00000411285 103 ntBASIC2.16□□□□□ -2.06
KRT40Q6A162 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.16□□□□□ -2.06
KRT40Q6A162 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.06
KRT40Q6A162 Y_RNA.336-201ENST00000365307 109 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 Y_RNA.353-201ENST00000365440 108 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 RNU6-424P-201ENST00000384367 105 ntBASIC2.15□□□□□ -2.07
KRT40Q6A162 SNORD20-201ENST00000384550 80 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms