Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 SNRPGP8-201ENST00000454064 226 ntBASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 RN7SKP164-201ENST00000516138 266 ntBASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-917P-201ENST00000516294 104 ntBASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 RNU1-92P-201ENST00000517017 135 ntBASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.38□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-1020P-201ENST00000363684 107 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.327-201ENST00000365201 102 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 MIR526A1-201ENST00000384897 85 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-907P-201ENST00000390924 102 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-1228P-201ENST00000391014 107 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 AL451046.2-201ENST00000403074 277 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.793-201ENST00000411222 111 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 AL138752.1-201ENST00000452964 351 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 RNU7-149P-201ENST00000516739 59 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 SNORA81.3-201ENST00000517283 198 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 AL512310.8-201ENST00000550183 120 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 CYP3A52P-201ENST00000563326 91 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 AL513534.2-201ENST00000603836 250 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 AL391903.3-201ENST00000612158 163 ntBASIC1.37□□□□□ -2.19
KRTCAP3Q53RY4 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.29-201ENST00000362570 113 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-103P-201ENST00000363686 107 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 SNORA25.9-201ENST00000365087 128 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.785-201ENST00000384290 109 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 MIR499A-201ENST00000384903 122 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.622-201ENST00000411091 108 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 AC015922.2-201ENST00000435593 184 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 SNORD77.4-201ENST00000516158 81 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-922P-201ENST00000516753 99 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.700-201ENST00000516806 100 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 RN7SKP88-201ENST00000516847 250 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 MIR4421-201ENST00000578133 69 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 MIR4744-201ENST00000581563 82 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 FAM106DP-201ENST00000586416 501 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 7SK.8-201ENST00000612110 250 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 AC004792.1-201ENST00000614523 137 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 7SK.11-201ENST00000615477 250 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Pinc.1-201ENST00000616452 154 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 MIR8070-201ENST00000616510 88 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 7SK.13-201ENST00000622040 250 ntBASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.121-201ENST00000363309 113 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.182-201ENST00000363880 111 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.233-201ENST00000364407 101 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-392P-201ENST00000364926 101 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-1138P-201ENST00000365359 106 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.435-201ENST00000384095 112 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNY3P5-201ENST00000384127 102 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 SNORD38C-201ENST00000384381 69 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNU4-70P-201ENST00000384579 139 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 MIR136-201ENST00000385207 82 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-578P-201ENST00000390980 103 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 SNRPGP14-201ENST00000435400 219 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.797-201ENST00000515977 94 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 AC090142.3-201ENST00000519012 385 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 AP002392.1-201ENST00000537692 208 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 MIR4662B-201ENST00000579498 81 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 AC108706.1-201ENST00000611053 297 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 U6.106-201ENST00000636360 105 ntBASIC1.35□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-484P-201ENST00000384016 107 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 Y_RNA.486-201ENST00000384398 107 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 MIR15B-201ENST00000385045 98 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 MIR618-201ENST00000385287 98 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 RNU6-1219P-201ENST00000516143 112 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 RNU7-40P-201ENST00000516397 64 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 AC109810.1-201ENST00000534066 224 ntBASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.34□□□□□ -2.19
KRTCAP3Q53RY4 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.34□□□□□ -2.2
KRTCAP3Q53RY4 SNORD45.3-201ENST00000363836 72 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-268P-201ENST00000364174 107 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 Y_RNA.412-201ENST00000384001 104 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 MIR1304-201ENST00000408243 91 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 RNU2-55P-201ENST00000411146 174 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 RNU2-64P-201ENST00000411315 191 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 RNU7-120P-201ENST00000459334 63 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 AC023790.1-201ENST00000482174 347 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-126P-201ENST00000516685 103 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 MIR3668-201ENST00000582138 75 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 AC072026.1-201ENST00000605023 201 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 GHRLOS.1-201ENST00000610995 70 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 AC006441.5-201ENST00000612680 209 ntBASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.33□□□□□ -2.2
KRTCAP3Q53RY4 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 U8.1-201ENST00000362843 134 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-682P-201ENST00000363843 106 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 SNORD41-201ENST00000386967 70 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 AL121914.1-201ENST00000450188 156 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-1299P-201ENST00000516316 100 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-861P-201ENST00000516745 106 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 RNU6-182P-201ENST00000516970 105 ntBASIC1.32□□□□□ -2.2
KRTCAP3Q53RY4 MIR3664-201ENST00000579074 99 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 168.8 ms