Protein–RNA interactions for Protein: Q53GI3

ZNF394, Zinc finger protein 394, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF394Q53GI3 AC011603.4-201ENST00000611325 277 ntBASIC2.36□□□□□ -2.03
ZNF394Q53GI3 AL590808.1-201ENST00000618696 141 ntBASIC2.36□□□□□ -2.03
ZNF394Q53GI3 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.36□□□□□ -2.03
ZNF394Q53GI3 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.36□□□□□ -2.03
ZNF394Q53GI3 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.36□□□□□ -2.03
ZNF394Q53GI3 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
ZNF394Q53GI3 Y_RNA.440-201ENST00000384120 114 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 RNU6-1117P-201ENST00000384525 104 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 MIR526A1-201ENST00000384897 85 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 MIR513A1-201ENST00000385138 129 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 SNORA3.2-201ENST00000408221 125 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 RNU6-938P-201ENST00000411285 103 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 RNU7-80P-201ENST00000459562 61 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 SNORD36C-201ENST00000516733 66 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 RNU6-1149P-201ENST00000516810 97 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 SCARNA15-202ENST00000516881 127 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 SNORA18.7-201ENST00000516910 131 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 MIR4448-201ENST00000584360 86 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 MIR6873-201ENST00000622788 63 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 AC064859.1-201ENST00000624741 174 ntBASIC2.35□□□□□ -2.03
ZNF394Q53GI3 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.35□□□□□ -2.03
ZNF394Q53GI3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ZNF394Q53GI3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ZNF394Q53GI3 MTND5P32-201ENST00000560711 1802 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.34□□□□□ -2.03
ZNF394Q53GI3 SNORA70.7-201ENST00000384159 133 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 RNU6-439P-201ENST00000384188 106 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 Y_RNA.454-201ENST00000384224 113 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 MIR653-201ENST00000385279 96 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 Y_RNA.690-201ENST00000516603 95 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 RNU6-113P-201ENST00000516653 101 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 RNU7-70P-201ENST00000516941 66 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 SUMO2P16-201ENST00000519475 264 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.34□□□□□ -2.03
ZNF394Q53GI3 AL096840.1-201ENST00000603287 93 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 AC009831.4-201ENST00000620744 325 ntBASIC2.34□□□□□ -2.03
ZNF394Q53GI3 RNU6-457P-201ENST00000363999 107 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 Y_RNA.241-201ENST00000364470 117 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 RNU6-1067P-201ENST00000384752 107 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 RNA5SP236-201ENST00000516169 116 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 AC090049.2-201ENST00000550377 109 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 FAM106DP-201ENST00000586416 501 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 AC103810.8-201ENST00000607347 118 ntBASIC2.33□□□□□ -2.04
ZNF394Q53GI3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
ZNF394Q53GI3 ZNF720P1-201ENST00000562403 1939 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 MIRLET7G-201ENST00000362280 84 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 SNORA27-201ENST00000384323 126 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 SNORD123-201ENST00000459473 70 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 RNU6-62P-201ENST00000516526 102 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 RNU2-60P-201ENST00000517290 128 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 SNORA77B-201ENST00000578179 125 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 AC002984.1-201ENST00000591692 448 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 AC095038.3-201ENST00000634439 195 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 MIR376A2-201ENST00000636782 80 ntBASIC2.32□□□□□ -2.04
ZNF394Q53GI3 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
ZNF394Q53GI3 RNA5SP259-201ENST00000365541 109 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 MIR30A-201ENST00000385092 71 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 AL606753.1-201ENST00000427435 87 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC2.31□□□□□ -2.04
ZNF394Q53GI3 RNU7-96P-201ENST00000459535 64 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 Y_RNA.686-201ENST00000516548 134 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 SNORA74.3-201ENST00000517108 154 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 AC015688.6-201ENST00000577737 104 ntBASIC2.31□□□□□ -2.04
ZNF394Q53GI3 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
ZNF394Q53GI3 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZNF394Q53GI3 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
ZNF394Q53GI3 ICE2P2-201ENST00000483823 2787 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 Y_RNA.370-201ENST00000365589 108 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 RNU6-80P-201ENST00000384195 107 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
ZNF394Q53GI3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 RNU7-43P-201ENST00000516554 64 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 RNU6-971P-201ENST00000516920 106 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 RNU7-181P-201ENST00000517234 74 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 AC090821.2-201ENST00000523552 176 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 MIR3198-2-201ENST00000577868 80 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 MIR3121-201ENST00000579680 77 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 FAS-AS1.2-201ENST00000620386 170 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 MIR6132-201ENST00000622083 109 ntBASIC2.3□□□□□ -2.04
ZNF394Q53GI3 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
ZNF394Q53GI3 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.29□□□□□ -2.04
ZNF394Q53GI3 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.29□□□□□ -2.04
ZNF394Q53GI3 Y_RNA.351-201ENST00000365436 96 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 SNORA67.3-201ENST00000384366 140 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 AL451046.2-201ENST00000403074 277 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 AL023284.1-201ENST00000403956 276 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RNA5SP425-201ENST00000410336 112 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 AL356320.1-201ENST00000429616 163 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 AC008267.6-201ENST00000441664 139 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RNU6-1211P-201ENST00000459179 105 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RPS29P24-201ENST00000486345 171 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RPS26P48-201ENST00000491713 339 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RNU6-917P-201ENST00000516294 104 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC2.29□□□□□ -2.04
ZNF394Q53GI3 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.29□□□□□ -2.04
ZNF394Q53GI3 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.29□□□□□ -2.04
ZNF394Q53GI3 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ZNF394Q53GI3 SNORD33-201ENST00000362761 85 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 177.8 ms