Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.400-201ENST00000383963 111 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 MIR504-201ENST00000385065 83 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 MIR516B2-201ENST00000385190 85 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 MIR676-201ENST00000390702 67 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 SNORA75.5-201ENST00000391291 81 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 MIR3198-2-201ENST00000577868 80 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 FAM106DP-201ENST00000586416 501 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 AC106754.2-201ENST00000623006 233 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 MIR3658-201ENST00000636291 56 ntBASIC1.83□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.410-201ENST00000383992 113 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 RNU6-746P-201ENST00000384112 109 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 MIR764-201ENST00000390811 85 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 SNORD37.2-201ENST00000391075 66 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 AC019129.1-201ENST00000403786 261 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 CYCSP49-201ENST00000420810 319 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 AF228730.3-201ENST00000436691 102 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 AC087499.4-201ENST00000448505 178 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 RNU4-57P-201ENST00000515980 135 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 RNU6-917P-201ENST00000516294 104 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 AC024614.2-201ENST00000577584 372 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 MIR3129-201ENST00000581095 76 ntBASIC1.82□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.37-201ENST00000362606 108 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 RNU6-1082P-201ENST00000364574 107 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.506-201ENST00000384494 102 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 MIR583-201ENST00000384846 75 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 MIR624-201ENST00000385217 97 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 SNORD77.3-201ENST00000391113 65 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 RNA5SP127-201ENST00000411051 133 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 RNU6-322P-201ENST00000516010 103 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 RNA5SP182-201ENST00000516064 82 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 SNORA18.4-201ENST00000516440 124 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 AC090049.2-201ENST00000550377 109 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 MIR7843-201ENST00000622274 79 ntBASIC1.81□□□□□ -2.12
KHDC1Q4VXA5 MIR302D-201ENST00000362275 68 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 SNORA16.1-201ENST00000364597 132 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 RNU4-11P-201ENST00000365287 132 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 U8.17-201ENST00000391292 132 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 MIR548M-201ENST00000408260 86 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 RNU6-588P-201ENST00000410281 105 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 AC005908.1-201ENST00000468701 347 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 RNU6-295P-201ENST00000516901 104 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 AC112693.2-201ENST00000556538 232 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 AL513534.2-201ENST00000603836 250 ntBASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.8□□□□□ -2.12
KHDC1Q4VXA5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.215-201ENST00000364204 112 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 RNU6-818P-201ENST00000364837 108 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 SNORD1A-201ENST00000364968 72 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 HSPE1P24-201ENST00000450782 238 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 AC008834.1-201ENST00000511612 175 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 MIR4419B-201ENST00000577260 68 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 MIR548X2-201ENST00000579776 100 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 AL365434.2-201ENST00000607979 234 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 MIR8063-201ENST00000621930 81 ntBASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
KHDC1Q4VXA5 WWP1P1-201ENST00000466609 2769 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 SNORD33-201ENST00000362761 85 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 SNORA1.2-201ENST00000365189 134 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 RNU6-1189P-201ENST00000383958 107 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 RNU6-125P-201ENST00000384505 107 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 MIR513C-201ENST00000401352 84 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 AL603908.1-201ENST00000406098 201 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 RNU6-938P-201ENST00000411285 103 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 SNORD123-201ENST00000459473 70 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 AC092991.1-201ENST00000477176 376 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 Y_RNA.703-201ENST00000516846 111 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 SNORA74.3-201ENST00000517108 154 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KHDC1Q4VXA5 RNA5SP363-201ENST00000365072 115 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 RNU6-1336P-201ENST00000383886 109 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 AL451046.2-201ENST00000403074 277 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 SUMO1P3-201ENST00000439961 304 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 SNORA18.7-201ENST00000516910 131 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 AP003484.1-201ENST00000530974 250 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 MIR8081-201ENST00000611533 95 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 AC084768.2-201ENST00000622736 221 ntBASIC1.77□□□□□ -2.13
KHDC1Q4VXA5 Y_RNA.488-201ENST00000384403 102 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 SNORA40.5-201ENST00000391061 128 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 SNORA26.9-201ENST00000391322 122 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 AL591806.2-201ENST00000433122 173 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 RNU7-197P-201ENST00000458836 62 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 AC079140.2-201ENST00000506193 142 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 RNU6-346P-201ENST00000516288 111 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 RNU7-181P-201ENST00000517234 74 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 MIR3133-201ENST00000583157 78 ntBASIC1.76□□□□□ -2.13
KHDC1Q4VXA5 MIR5197-201ENST00000583721 112 ntBASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 281.9 ms