Protein–RNA interactions for Protein: P59025

RTP1, Receptor-transporting protein 1, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP1P59025 Y_RNA.226-201ENST00000364337 114 ntBASIC2.53□□□□□ -2
RTP1P59025 Y_RNA.336-201ENST00000365307 109 ntBASIC2.53□□□□□ -2
RTP1P59025 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC2.53□□□□□ -2
RTP1P59025 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
RTP1P59025 RNU6-349P-201ENST00000362402 107 ntBASIC2.52□□□□□ -2.01
RTP1P59025 RNU6-690P-201ENST00000365242 106 ntBASIC2.52□□□□□ -2.01
RTP1P59025 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.52□□□□□ -2.01
RTP1P59025 Y_RNA.694-201ENST00000516677 117 ntBASIC2.52□□□□□ -2.01
RTP1P59025 RNU7-28P-201ENST00000516759 62 ntBASIC2.52□□□□□ -2.01
RTP1P59025 AC026271.5-201ENST00000577873 130 ntBASIC2.52□□□□□ -2.01
RTP1P59025 MIR219B-201ENST00000637023 88 ntBASIC2.52□□□□□ -2.01
RTP1P59025 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
RTP1P59025 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.51□□□□□ -2.01
RTP1P59025 Y_RNA.198-201ENST00000364013 98 ntBASIC2.51□□□□□ -2.01
RTP1P59025 Y_RNA.440-201ENST00000384120 114 ntBASIC2.51□□□□□ -2.01
RTP1P59025 MIR221-201ENST00000385135 110 ntBASIC2.51□□□□□ -2.01
RTP1P59025 RNU6-440P-201ENST00000390882 105 ntBASIC2.51□□□□□ -2.01
RTP1P59025 AL023284.1-201ENST00000403956 276 ntBASIC2.51□□□□□ -2.01
RTP1P59025 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.51□□□□□ -2.01
RTP1P59025 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
RTP1P59025 RPS29P24-201ENST00000486345 171 ntBASIC2.51□□□□□ -2.01
RTP1P59025 RNY4P20-201ENST00000516678 93 ntBASIC2.51□□□□□ -2.01
RTP1P59025 AC009831.4-201ENST00000620744 325 ntBASIC2.51□□□□□ -2.01
RTP1P59025 MIR8054-201ENST00000620877 86 ntBASIC2.51□□□□□ -2.01
RTP1P59025 AL035470.1-201ENST00000622571 220 ntBASIC2.51□□□□□ -2.01
RTP1P59025 RNU1-58P-201ENST00000362413 163 ntBASIC2.5□□□□□ -2.01
RTP1P59025 U8.13-201ENST00000390842 128 ntBASIC2.5□□□□□ -2.01
RTP1P59025 SNORA11.4-201ENST00000408823 129 ntBASIC2.5□□□□□ -2.01
RTP1P59025 STAG3L5P-204ENST00000443759 179 ntBASIC2.5□□□□□ -2.01
RTP1P59025 AC114811.1-201ENST00000507207 168 ntBASIC2.5□□□□□ -2.01
RTP1P59025 Y_RNA.677-201ENST00000516401 85 ntBASIC2.5□□□□□ -2.01
RTP1P59025 RNU6-1116P-201ENST00000517269 99 ntBASIC2.5□□□□□ -2.01
RTP1P59025 AP003484.1-201ENST00000530974 250 ntBASIC2.5□□□□□ -2.01
RTP1P59025 AC084364.2-201ENST00000546924 395 ntBASIC2.5□□□□□ -2.01
RTP1P59025 MIR5582-201ENST00000579697 68 ntBASIC2.5□□□□□ -2.01
RTP1P59025 AC005786.1-201ENST00000588553 154 ntBASIC2.5□□□□□ -2.01
RTP1P59025 AC002984.1-201ENST00000591692 448 ntBASIC2.5□□□□□ -2.01
RTP1P59025 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
RTP1P59025 MT-TI-201ENST00000387365 69 ntBASIC2.49□□□□□ -2.01
RTP1P59025 SNORA26.9-201ENST00000391322 122 ntBASIC2.49□□□□□ -2.01
RTP1P59025 BX510359.4-201ENST00000423750 193 ntBASIC2.49□□□□□ -2.01
RTP1P59025 SUMO1P4-201ENST00000429430 302 ntBASIC2.49□□□□□ -2.01
RTP1P59025 HMGN2P32-201ENST00000444648 269 ntBASIC2.49□□□□□ -2.01
RTP1P59025 AC108729.3-201ENST00000513484 108 ntBASIC2.49□□□□□ -2.01
RTP1P59025 SNORA31.10-201ENST00000516482 106 ntBASIC2.49□□□□□ -2.01
RTP1P59025 AC006254.2-201ENST00000603259 279 ntBASIC2.49□□□□□ -2.01
RTP1P59025 AC021443.1-201ENST00000604478 211 ntBASIC2.49□□□□□ -2.01
RTP1P59025 AC015726.2-201ENST00000620112 122 ntBASIC2.49□□□□□ -2.01
RTP1P59025 AC106754.2-201ENST00000623006 233 ntBASIC2.49□□□□□ -2.01
RTP1P59025 MIRLET7C-201ENST00000362160 84 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNU1-17P-201ENST00000363022 152 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNA5SP393-201ENST00000363423 117 ntBASIC2.48□□□□□ -2.01
RTP1P59025 SNORA63.5-201ENST00000363548 123 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNU6-1019P-201ENST00000364424 107 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNU1-133P-201ENST00000364867 167 ntBASIC2.48□□□□□ -2.01
RTP1P59025 Y_RNA.351-201ENST00000365436 96 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNY1P6-201ENST00000384193 109 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.48□□□□□ -2.01
RTP1P59025 AC087499.4-201ENST00000448505 178 ntBASIC2.48□□□□□ -2.01
RTP1P59025 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.48□□□□□ -2.01
RTP1P59025 RNU6-1053P-201ENST00000515930 101 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNA5SP200-201ENST00000516360 103 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNA5SP82-201ENST00000516707 92 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RNU7-70P-201ENST00000516941 66 ntBASIC2.48□□□□□ -2.01
RTP1P59025 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.48□□□□□ -2.01
RTP1P59025 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.48□□□□□ -2.01
RTP1P59025 MIR4498-201ENST00000577599 66 ntBASIC2.48□□□□□ -2.01
RTP1P59025 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.48□□□□□ -2.01
RTP1P59025 ICE2P2-201ENST00000483823 2787 ntBASIC2.48□□□□□ -2.01
RTP1P59025 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
RTP1P59025 Y_RNA.163-201ENST00000363702 113 ntBASIC2.47□□□□□ -2.01
RTP1P59025 SNORA38-201ENST00000363946 132 ntBASIC2.47□□□□□ -2.01
RTP1P59025 Y_RNA.298-201ENST00000364960 107 ntBASIC2.47□□□□□ -2.01
RTP1P59025 RNU6-1014P-201ENST00000383940 103 ntBASIC2.47□□□□□ -2.01
RTP1P59025 MIR29C-201ENST00000385231 88 ntBASIC2.47□□□□□ -2.01
RTP1P59025 RNU6-830P-201ENST00000516353 107 ntBASIC2.47□□□□□ -2.01
RTP1P59025 SNORA18.7-201ENST00000516910 131 ntBASIC2.47□□□□□ -2.01
RTP1P59025 RNU6-537P-201ENST00000517277 103 ntBASIC2.47□□□□□ -2.01
RTP1P59025 SUMO2P16-201ENST00000519475 264 ntBASIC2.47□□□□□ -2.01
RTP1P59025 RNY4P6-201ENST00000363667 96 ntBASIC2.46□□□□□ -2.02
RTP1P59025 Y_RNA.328-201ENST00000365208 113 ntBASIC2.46□□□□□ -2.02
RTP1P59025 RNU1-51P-201ENST00000365345 176 ntBASIC2.46□□□□□ -2.02
RTP1P59025 RNU6-163P-201ENST00000384396 106 ntBASIC2.46□□□□□ -2.02
RTP1P59025 RNU1-148P-201ENST00000384472 162 ntBASIC2.46□□□□□ -2.02
RTP1P59025 SNORA48.3-201ENST00000391081 134 ntBASIC2.46□□□□□ -2.02
RTP1P59025 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.46□□□□□ -2.02
RTP1P59025 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.46□□□□□ -2.02
RTP1P59025 AC069114.2-201ENST00000604699 304 ntBASIC2.46□□□□□ -2.02
RTP1P59025 RNU6-94P-201ENST00000607728 107 ntBASIC2.46□□□□□ -2.02
RTP1P59025 AC005336.3-201ENST00000623833 2679 ntBASIC2.46□□□□□ -2.02
RTP1P59025 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
RTP1P59025 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
RTP1P59025 AL589743.1-201ENST00000551932 2712 ntBASIC2.45□□□□□ -2.02
RTP1P59025 RNU6-766P-201ENST00000362478 107 ntBASIC2.45□□□□□ -2.02
RTP1P59025 RNU6-414P-201ENST00000363705 104 ntBASIC2.45□□□□□ -2.02
RTP1P59025 Y_RNA.213-201ENST00000364178 111 ntBASIC2.45□□□□□ -2.02
RTP1P59025 Y_RNA.323-201ENST00000365157 109 ntBASIC2.45□□□□□ -2.02
RTP1P59025 Y_RNA.362-201ENST00000365518 110 ntBASIC2.45□□□□□ -2.02
RTP1P59025 RNU6-756P-201ENST00000383997 107 ntBASIC2.45□□□□□ -2.02
RTP1P59025 SNORD38C-201ENST00000384381 69 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 186.8 ms