Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL358944.1-201ENST00000528537 144 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 RPL23AP91-201ENST00000569211 455 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 AC130289.1-201ENST00000577321 73 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 MIR4308-201ENST00000580634 81 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 AC073349.3-201ENST00000617616 186 ntBASIC1.09□□□□□ -2.23
RIPK4P57078 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
RIPK4P57078 SNORD68-201ENST00000363214 84 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 Y_RNA.274-201ENST00000364714 101 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 RNU6-923P-201ENST00000364753 107 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 Y_RNA.308-201ENST00000365043 101 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 RNU6-47P-201ENST00000383866 107 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 PIGPP3-201ENST00000425307 415 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 SNORD11-201ENST00000459124 84 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 AL133373.1-201ENST00000497098 94 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.08□□□□□ -2.24
RIPK4P57078 RNU6-561P-201ENST00000516222 102 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 AC009779.6-201ENST00000603972 165 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 AL021707.8-201ENST00000609428 183 ntBASIC1.08□□□□□ -2.24
RIPK4P57078 RNA5SP259-201ENST00000365541 109 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 RNU6-144P-201ENST00000383951 107 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 Y_RNA.476-201ENST00000384347 108 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 RNU6-424P-201ENST00000384367 105 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.07□□□□□ -2.24
RIPK4P57078 SNORD72-201ENST00000390994 80 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 RNU6-493P-201ENST00000391321 108 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 AL034345.1-201ENST00000407768 123 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 MIR1298-201ENST00000408783 112 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 Y_RNA.618-201ENST00000410949 107 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.07□□□□□ -2.24
RIPK4P57078 AC114811.1-201ENST00000507207 168 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 SUMO2P16-201ENST00000519475 264 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 AC022559.1-201ENST00000520905 205 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 MIR4778-201ENST00000577635 80 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 MIR4762-201ENST00000585261 75 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 AC090425.1-201ENST00000610007 140 ntBASIC1.07□□□□□ -2.24
RIPK4P57078 Y_RNA.229-201ENST00000364347 113 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 Y_RNA.489-201ENST00000384410 101 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 RNU6-381P-201ENST00000391259 108 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 RNA5SP482-201ENST00000391269 118 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 RNU6ATAC31P-201ENST00000408513 126 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC1.06□□□□□ -2.24
RIPK4P57078 AC245047.8-201ENST00000456455 284 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.06□□□□□ -2.24
RIPK4P57078 RNU6-351P-201ENST00000516097 100 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 RNU4-71P-201ENST00000516258 113 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 RNA5SP480-201ENST00000516840 109 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.06□□□□□ -2.24
RIPK4P57078 MIR4724-201ENST00000579485 89 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 MIR3671-201ENST00000580455 88 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 AL049861.1-201ENST00000603130 150 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 Y_RNA.802-201ENST00000614892 130 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 AC141273.2-201ENST00000618989 130 ntBASIC1.06□□□□□ -2.24
RIPK4P57078 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RIPK4P57078 RNA5SP327-201ENST00000362494 101 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 Y_RNA.199-201ENST00000364014 102 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 U8.5-201ENST00000364528 136 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 SNORA8.3-201ENST00000384679 139 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 MIR562-201ENST00000384894 95 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 MIR526A2-201ENST00000390198 65 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 RNU6-918P-201ENST00000391219 106 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 SNRPGP14-201ENST00000435400 219 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 SNORA28-201ENST00000606769 126 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 MIR8065-201ENST00000620577 100 ntBASIC1.05□□□□□ -2.24
RIPK4P57078 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.04□□□□□ -2.24
RIPK4P57078 SNORD114-2-201ENST00000363953 78 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 Y_RNA.200-201ENST00000364018 102 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 Y_RNA.257-201ENST00000364596 102 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RNU6-1318P-201ENST00000365389 103 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 MIR526A1-201ENST00000384897 85 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 MIR660-201ENST00000385235 97 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 Y_RNA.587-201ENST00000391210 103 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 MIR548J-201ENST00000408833 112 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 SNRPGP8-201ENST00000454064 226 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.04□□□□□ -2.24
RIPK4P57078 RNU6-138P-201ENST00000515952 107 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RNU7-12P-201ENST00000516030 62 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 SNORD45.4-201ENST00000516629 73 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RNU7-28P-201ENST00000516759 62 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RN7SKP88-201ENST00000516847 250 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RNU6-165P-201ENST00000517170 99 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 AL513534.2-201ENST00000603836 250 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 7SK.8-201ENST00000612110 250 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 7SK.11-201ENST00000615477 250 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 RMST_2.1-201ENST00000617263 136 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 7SK.13-201ENST00000622040 250 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 AC106754.2-201ENST00000623006 233 ntBASIC1.04□□□□□ -2.24
RIPK4P57078 AL442644.1-201ENST00000454390 3105 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 MIR411-201ENST00000362239 96 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 Y_RNA.83-201ENST00000363005 113 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 Y_RNA.262-201ENST00000364641 102 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 MIR146A-201ENST00000385201 99 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 MIR653-201ENST00000385279 96 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.03□□□□□ -2.24
RIPK4P57078 RNU7-40P-201ENST00000516397 64 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
RIPK4P57078 AC008507.4-201ENST00000585464 127 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 AC120024.3-201ENST00000603167 156 ntBASIC1.03□□□□□ -2.24
RIPK4P57078 RNU2-4P-201ENST00000606190 192 ntBASIC1.03□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 306.8 ms