Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 SNORD88.1-201ENST00000408684 91 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 RNU4-69P-201ENST00000410677 143 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.86□□□□□ -1.95
NFKB1P19838 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.86□□□□□ -1.95
NFKB1P19838 RNU7-61P-201ENST00000515897 61 ntBASIC2.86□□□□□ -1.95
NFKB1P19838 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.86□□□□□ -1.95
NFKB1P19838 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.86□□□□□ -1.95
NFKB1P19838 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
NFKB1P19838 RNU6-170P-201ENST00000362832 104 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 MIR627-201ENST00000384979 97 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 RNU6-1319P-201ENST00000390855 104 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 RNU6-747P-201ENST00000390928 104 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 RNU6-241P-201ENST00000391148 104 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 RNU6-177P-201ENST00000411257 104 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 AL353813.1-201ENST00000440700 253 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 Z96811.1-201ENST00000445880 108 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.85□□□□□ -1.95
NFKB1P19838 RPPH1-2P-201ENST00000516688 293 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 AC012531.4-201ENST00000616509 177 ntBASIC2.85□□□□□ -1.95
NFKB1P19838 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.85□□□□□ -1.95
NFKB1P19838 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NFKB1P19838 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NFKB1P19838 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NFKB1P19838 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
NFKB1P19838 Y_RNA.17-201ENST00000362433 111 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 Y_RNA.171-201ENST00000363760 102 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 SNORA1.2-201ENST00000365189 134 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 RNU6-950P-201ENST00000384651 107 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 RNU7-113P-201ENST00000459273 62 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 RNU7-45P-201ENST00000459460 63 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 S100A11P2-201ENST00000467589 312 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 UBE2DNL-203ENST00000474922 222 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 UBL5P3-201ENST00000475112 231 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 RNU6-795P-201ENST00000516323 103 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 RNA5SP168-201ENST00000516642 112 ntBASIC2.84□□□□□ -1.95
NFKB1P19838 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.84□□□□□ -1.95
NFKB1P19838 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.84□□□□□ -1.95
NFKB1P19838 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
NFKB1P19838 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.96
NFKB1P19838 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.84□□□□□ -1.96
NFKB1P19838 AC009487.2-201ENST00000420969 6821 ntBASIC2.84□□□□□ -1.96
NFKB1P19838 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
NFKB1P19838 AL161431.1-201ENST00000618966 4205 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 SNORD115-2-201ENST00000362842 82 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 SNORD115-20-201ENST00000365099 82 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 Y_RNA.500-201ENST00000384466 111 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 MIR605-201ENST00000385078 83 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 SNORD78.1-201ENST00000390866 65 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 RNU6-644P-201ENST00000391155 98 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 BX510359.4-201ENST00000423750 193 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 AC104389.3-201ENST00000445629 235 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 RNU6-1258P-201ENST00000516911 111 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 MIR5094-201ENST00000578766 85 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 AC022202.1-201ENST00000613515 211 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 MIR6841-201ENST00000637129 72 ntBASIC2.83□□□□□ -1.96
NFKB1P19838 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
NFKB1P19838 MIR26A1-201ENST00000362205 77 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 SNORA70.7-201ENST00000384159 133 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 RNU6-679P-201ENST00000391003 106 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 SNORA9.3-201ENST00000516383 129 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 MIR3605-201ENST00000583214 100 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.82□□□□□ -1.96
NFKB1P19838 AC103810.6-201ENST00000606708 136 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 U7.3-201ENST00000616123 62 ntBASIC2.82□□□□□ -1.96
NFKB1P19838 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.82□□□□□ -1.96
NFKB1P19838 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.82□□□□□ -1.96
NFKB1P19838 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
NFKB1P19838 SNORA22.1-201ENST00000362701 134 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 Y_RNA.377-201ENST00000365644 108 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 MIR452-201ENST00000385020 85 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 RNA5SP492-201ENST00000411330 114 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.81□□□□□ -1.96
NFKB1P19838 AC092427.1-202ENST00000430569 476 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 RN7SL499P-201ENST00000481141 276 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 RNU7-12P-201ENST00000516030 62 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.81□□□□□ -1.96
NFKB1P19838 MIR3152-201ENST00000579801 74 ntBASIC2.81□□□□□ -1.96
NFKB1P19838 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.8□□□□□ -1.96
NFKB1P19838 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
NFKB1P19838 Y_RNA.370-201ENST00000365589 108 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 SNORD77B-201ENST00000391112 67 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 SNORA7.5-201ENST00000410672 110 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 RN7SKP192-201ENST00000411291 327 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 UBBP3-201ENST00000445497 241 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 RNU7-53P-201ENST00000516705 60 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 AC022254.1-201ENST00000567857 235 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 AC006386.2-201ENST00000624491 75 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 AC012005.1-201ENST00000624575 75 ntBASIC2.8□□□□□ -1.96
NFKB1P19838 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
NFKB1P19838 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
NFKB1P19838 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
NFKB1P19838 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
NFKB1P19838 SNORD56.5-201ENST00000364281 72 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 SNORD45B-201ENST00000364617 72 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 RNU6-60P-201ENST00000364792 103 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 Y_RNA.470-201ENST00000384307 117 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 RNU6-616P-201ENST00000384353 107 ntBASIC2.79□□□□□ -1.96
NFKB1P19838 SNORA18-201ENST00000384416 132 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 220.8 ms