Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
HLA-DOBP13765 AC090049.2-201ENST00000550377 109 ntBASIC1.38□□□□□ -2.19
HLA-DOBP13765 BX248123.2-201ENST00000606318 124 ntBASIC1.38□□□□□ -2.19
HLA-DOBP13765 AC015726.2-201ENST00000620112 122 ntBASIC1.38□□□□□ -2.19
HLA-DOBP13765 MIR8063-201ENST00000621930 81 ntBASIC1.38□□□□□ -2.19
HLA-DOBP13765 AC106754.2-201ENST00000623006 233 ntBASIC1.38□□□□□ -2.19
HLA-DOBP13765 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC1.38□□□□□ -2.19
HLA-DOBP13765 WWP1P1-201ENST00000466609 2769 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 Y_RNA.521-201ENST00000384560 114 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 Y_RNA.542-201ENST00000384641 111 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 Y_RNA.547-201ENST00000384654 119 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 MIR548A2-201ENST00000384956 97 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 MIR518F-201ENST00000384973 87 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 MIR516B2-201ENST00000385190 85 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 AL591806.2-201ENST00000433122 173 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 AC092991.1-201ENST00000477176 376 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 RNU6-917P-201ENST00000516294 104 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 RNU7-121P-201ENST00000516604 62 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
HLA-DOBP13765 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
HLA-DOBP13765 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.37□□□□□ -2.19
HLA-DOBP13765 RNU6-597P-201ENST00000365620 102 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 MIR934-201ENST00000401241 83 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 MIR1304-201ENST00000408243 91 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 RNU6-394P-201ENST00000410735 107 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 AC079140.2-201ENST00000506193 142 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 RNU6-1212P-201ENST00000517023 104 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 RNU6-548P-201ENST00000517083 115 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 RNU6-1270P-201ENST00000517128 108 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 AC007751.1-201ENST00000529260 376 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.36□□□□□ -2.19
HLA-DOBP13765 AL365205.2-201ENST00000594586 68 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 AL513534.2-201ENST00000603836 250 ntBASIC1.36□□□□□ -2.19
HLA-DOBP13765 SNORD115-28-201ENST00000363931 81 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 SNORA25.7-201ENST00000364375 127 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 SNORD1A-201ENST00000364968 72 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 Y_RNA.393-201ENST00000383936 102 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 Y_RNA.580-201ENST00000391004 95 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 AL451046.2-201ENST00000403074 277 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 AC087499.4-201ENST00000448505 178 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.35□□□□□ -2.19
HLA-DOBP13765 RNU4-57P-201ENST00000515980 135 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 MIR3646-201ENST00000578301 84 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 MIR4422-201ENST00000581938 83 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 AC134878.1-201ENST00000619901 243 ntBASIC1.35□□□□□ -2.19
HLA-DOBP13765 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
HLA-DOBP13765 RNU1-17P-201ENST00000363022 152 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 Y_RNA.410-201ENST00000383992 113 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 RNU6-1065P-201ENST00000384513 106 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 MIR320A-201ENST00000385302 82 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 SNX2P2-201ENST00000424553 323 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC1.34□□□□□ -2.19
HLA-DOBP13765 AC023790.1-201ENST00000482174 347 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 MIR3144-201ENST00000579460 79 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 DNAJC19P2-201ENST00000593340 302 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 AL645939.4-201ENST00000604495 135 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 AL365434.2-201ENST00000607979 234 ntBASIC1.34□□□□□ -2.19
HLA-DOBP13765 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
HLA-DOBP13765 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DOBP13765 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU6-60P-201ENST00000364792 103 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 SNORA1.2-201ENST00000365189 134 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU6-1292P-201ENST00000383856 107 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU6-449P-201ENST00000383914 107 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 SNORA1-201ENST00000384107 130 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU6-768P-201ENST00000384683 107 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU6-997P-201ENST00000384725 107 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 RNU1-78P-201ENST00000391248 165 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 U8.17-201ENST00000391292 132 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DOBP13765 AC027119.1-201ENST00000440877 241 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 AC245517.4-201ENST00000448601 281 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 SNORD123-201ENST00000459473 70 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 SNORD53B-201ENST00000577887 78 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 AL357312.1-201ENST00000603879 298 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 AC104465.1-201ENST00000611365 139 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.33□□□□□ -2.2
HLA-DOBP13765 MTND1P7-201ENST00000632801 297 ntBASIC1.33□□□□□ -2.2
HLA-DOBP13765 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
HLA-DOBP13765 Y_RNA.37-201ENST00000362606 108 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 RNU6-804P-201ENST00000384286 107 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 MIR517C-201ENST00000385103 95 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 SNORA75.5-201ENST00000391291 81 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 AL354695.1-201ENST00000427935 228 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 AF228730.3-201ENST00000436691 102 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 RNA5SP445-201ENST00000515889 115 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 RNU7-43P-201ENST00000516554 64 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 RNU6-922P-201ENST00000516753 99 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 SNORA18.7-201ENST00000516910 131 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 MIR3937-201ENST00000580135 106 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 MIR3129-201ENST00000581095 76 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 MIR4303-201ENST00000581299 66 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 GHRLOS.1-201ENST00000610995 70 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 AP000648.3-201ENST00000623539 4507 ntBASIC1.32□□□□□ -2.2
HLA-DOBP13765 MIR624-201ENST00000385217 97 ntBASIC1.31□□□□□ -2.2
HLA-DOBP13765 SNORD41-201ENST00000386967 70 ntBASIC1.31□□□□□ -2.2
HLA-DOBP13765 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
HLA-DOBP13765 RNA5SP127-201ENST00000411051 133 ntBASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 197.5 ms