Protein–RNA interactions for Protein: O95238

SPDEF, SAM pointed domain-containing Ets transcription factor, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDEFO95238 SNORA18.7-201ENST00000516910 131 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.94□□□□□ -2.1
SPDEFO95238 AC002984.1-201ENST00000591692 448 ntBASIC1.94□□□□□ -2.1
SPDEFO95238 ICE2P2-201ENST00000483823 2787 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNU6-349P-201ENST00000362402 107 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNU6-755P-201ENST00000364400 103 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 Y_RNA.528-201ENST00000384575 108 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNA5SP450-201ENST00000411206 102 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 AC063976.4-201ENST00000421971 163 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 Y_RNA.649-201ENST00000459077 103 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNU7-12P-201ENST00000516030 62 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNU6-240P-201ENST00000516098 97 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNA5SP481-201ENST00000516814 122 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 RNU7-70P-201ENST00000516941 66 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 AC103810.6-201ENST00000606708 136 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 U1.36-201ENST00000620684 176 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 UGP2-230ENST00000626380 276 ntTSL 5 BASIC1.93□□□□□ -2.1
SPDEFO95238 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.93□□□□□ -2.1
SPDEFO95238 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.93□□□□□ -2.1
SPDEFO95238 AL365361.1-201ENST00000566942 3481 ntBASIC1.93□□□□□ -2.1
SPDEFO95238 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.93□□□□□ -2.1
SPDEFO95238 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC1.92□□□□□ -2.1
SPDEFO95238 Y_RNA.35-201ENST00000362601 101 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 RNA5SP68-201ENST00000363885 119 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 RNA5SP138-201ENST00000365098 114 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 Y_RNA.351-201ENST00000365436 96 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 AL627390.1-201ENST00000396055 340 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 RNA5SP338-201ENST00000410495 85 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC1.92□□□□□ -2.1
SPDEFO95238 HMGN2P19-201ENST00000425149 265 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 snoU13.27-201ENST00000459278 104 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 RNU7-34P-201ENST00000459394 64 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 MIR4709-201ENST00000577272 72 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 MIR4299-201ENST00000577899 72 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 MIR3162-201ENST00000581818 82 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 AC021506.2-201ENST00000612354 169 ntBASIC1.92□□□□□ -2.1
SPDEFO95238 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.91□□□□□ -2.1
SPDEFO95238 RNU1-133P-201ENST00000364867 167 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 RNU6-690P-201ENST00000365242 106 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 RNY1P6-201ENST00000384193 109 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 RNU6-880P-201ENST00000384526 107 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 MIR548A1-201ENST00000385041 97 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC1.91□□□□□ -2.1
SPDEFO95238 RNU7-80P-201ENST00000459562 61 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 AC099513.1-201ENST00000490423 301 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 COX6CP6-201ENST00000490840 228 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 AC234781.5-201ENST00000508429 271 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 RNA5SP148-201ENST00000516527 94 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 RNA5SP364-201ENST00000516938 78 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.91□□□□□ -2.1
SPDEFO95238 AL513423.1-201ENST00000621695 132 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 AC091932.4-201ENST00000623386 200 ntBASIC1.91□□□□□ -2.1
SPDEFO95238 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
SPDEFO95238 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 Y_RNA.241-201ENST00000364470 117 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 SNORA22-201ENST00000383907 134 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 Y_RNA.454-201ENST00000384224 113 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 SNORA27-201ENST00000384323 126 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 MIR452-201ENST00000385020 85 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SPDEFO95238 RNA5SP100-201ENST00000410903 110 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 RNA5SP59-201ENST00000410922 110 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 RPL23AP42-201ENST00000471152 471 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 MIR4448-201ENST00000584360 86 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.9□□□□□ -2.11
SPDEFO95238 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
SPDEFO95238 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-34-201ENST00000362441 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-12-201ENST00000362583 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-29-201ENST00000362834 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-9-201ENST00000362912 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-21-201ENST00000362963 81 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-14-201ENST00000363090 81 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-13-201ENST00000363358 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-41-201ENST00000363608 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-11-201ENST00000363616 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-5-201ENST00000363633 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-39-201ENST00000363694 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-4-201ENST00000363810 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-16-201ENST00000363887 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-6-201ENST00000363942 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-42-201ENST00000364273 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-15-201ENST00000364809 81 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-1-201ENST00000364961 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-26-201ENST00000365067 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-10-201ENST00000365073 81 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-43-201ENST00000365503 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-36-201ENST00000365629 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 MIR570-201ENST00000384917 97 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 MIR660-201ENST00000385235 97 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 KRTAP19-11P-201ENST00000439851 104 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 RPL23AP6-201ENST00000446637 472 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 AC108938.1-201ENST00000451204 136 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC1.89□□□□□ -2.11
SPDEFO95238 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
SPDEFO95238 MIR5007-201ENST00000583098 95 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 SNORD115-40-201ENST00000606510 82 ntBASIC1.89□□□□□ -2.11
SPDEFO95238 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 193 ms