Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 AL512605.2-201ENST00000592972 256 ntBASIC0.72□□□□□ -2.29
SDC3O75056 RNU6-1272P-201ENST00000362776 107 ntBASIC0.71□□□□□ -2.3
SDC3O75056 Y_RNA.138-201ENST00000363462 102 ntBASIC0.71□□□□□ -2.3
SDC3O75056 RNU6-613P-201ENST00000410412 108 ntBASIC0.71□□□□□ -2.3
SDC3O75056 AC006461.1-201ENST00000412637 326 ntBASIC0.71□□□□□ -2.3
SDC3O75056 ELOCP20-201ENST00000422460 345 ntBASIC0.71□□□□□ -2.3
SDC3O75056 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.71□□□□□ -2.3
SDC3O75056 AC023449.1-201ENST00000454464 154 ntBASIC0.71□□□□□ -2.3
SDC3O75056 U7.7-201ENST00000459276 60 ntBASIC0.71□□□□□ -2.3
SDC3O75056 RNU2-13P-201ENST00000515909 113 ntBASIC0.71□□□□□ -2.3
SDC3O75056 AC004812.1-201ENST00000540773 146 ntBASIC0.71□□□□□ -2.3
SDC3O75056 MIR5692C2-201ENST00000577959 77 ntBASIC0.71□□□□□ -2.3
SDC3O75056 MIR4653-201ENST00000585107 83 ntBASIC0.71□□□□□ -2.3
SDC3O75056 MIR6516-201ENST00000630554 81 ntBASIC0.71□□□□□ -2.3
SDC3O75056 RNU6-1138P-201ENST00000365359 106 ntBASIC0.7□□□□□ -2.3
SDC3O75056 Y_RNA.541-201ENST00000384640 113 ntBASIC0.7□□□□□ -2.3
SDC3O75056 MIR100-201ENST00000385259 80 ntBASIC0.7□□□□□ -2.3
SDC3O75056 SNORA53-201ENST00000391141 249 ntBASIC0.7□□□□□ -2.3
SDC3O75056 RNU6-1143P-201ENST00000516125 104 ntBASIC0.7□□□□□ -2.3
SDC3O75056 MIR2115-201ENST00000516657 100 ntBASIC0.7□□□□□ -2.3
SDC3O75056 AC131281.1-201ENST00000522984 164 ntBASIC0.7□□□□□ -2.3
SDC3O75056 AC113195.1-201ENST00000579952 141 ntBASIC0.7□□□□□ -2.3
SDC3O75056 AC037487.3-201ENST00000606668 112 ntBASIC0.7□□□□□ -2.3
SDC3O75056 uc_338.4-201ENST00000616635 176 ntBASIC0.7□□□□□ -2.3
SDC3O75056 AC015726.2-201ENST00000620112 122 ntBASIC0.7□□□□□ -2.3
SDC3O75056 MIR6513-201ENST00000621188 64 ntBASIC0.7□□□□□ -2.3
SDC3O75056 AC023934.1-201ENST00000574529 2389 ntBASIC0.7□□□□□ -2.3
SDC3O75056 Y_RNA.217-201ENST00000364214 105 ntBASIC0.69□□□□□ -2.3
SDC3O75056 SNORD113.3-201ENST00000364630 78 ntBASIC0.69□□□□□ -2.3
SDC3O75056 SNORA51.10-201ENST00000384418 136 ntBASIC0.69□□□□□ -2.3
SDC3O75056 RPS26P5-201ENST00000418544 335 ntBASIC0.69□□□□□ -2.3
SDC3O75056 MTCO2P12-201ENST00000427426 682 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AL035398.1-201ENST00000430869 322 ntBASIC0.69□□□□□ -2.3
SDC3O75056 Y_RNA.641-201ENST00000459414 105 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AC098869.1-201ENST00000481627 292 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AC091959.1-201ENST00000495857 238 ntBASIC0.69□□□□□ -2.3
SDC3O75056 SCARNA8-201ENST00000515924 131 ntBASIC0.69□□□□□ -2.3
SDC3O75056 RNU6-1110P-201ENST00000516462 101 ntBASIC0.69□□□□□ -2.3
SDC3O75056 SNORA27.4-201ENST00000516650 95 ntBASIC0.69□□□□□ -2.3
SDC3O75056 RNU7-181P-201ENST00000517234 74 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AC020661.2-201ENST00000560114 134 ntBASIC0.69□□□□□ -2.3
SDC3O75056 MIR5688-201ENST00000580619 83 ntBASIC0.69□□□□□ -2.3
SDC3O75056 MIR3171-201ENST00000584270 74 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AL590095.2-201ENST00000604136 117 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AL353765.1-201ENST00000605514 183 ntBASIC0.69□□□□□ -2.3
SDC3O75056 MIR4791-201ENST00000607666 84 ntBASIC0.69□□□□□ -2.3
SDC3O75056 AC104465.1-201ENST00000611365 139 ntBASIC0.69□□□□□ -2.3
SDC3O75056 SNORA25.1-201ENST00000362326 128 ntBASIC0.68□□□□□ -2.3
SDC3O75056 Y_RNA.14-201ENST00000362415 103 ntBASIC0.68□□□□□ -2.3
SDC3O75056 Y_RNA.19-201ENST00000362462 99 ntBASIC0.68□□□□□ -2.3
SDC3O75056 Y_RNA.152-201ENST00000363578 100 ntBASIC0.68□□□□□ -2.3
SDC3O75056 MIR570-201ENST00000384917 97 ntBASIC0.68□□□□□ -2.3
SDC3O75056 RNU6-383P-201ENST00000410864 94 ntBASIC0.68□□□□□ -2.3
SDC3O75056 RNU6-847P-201ENST00000411115 108 ntBASIC0.68□□□□□ -2.3
SDC3O75056 AC113410.1-201ENST00000505029 247 ntBASIC0.68□□□□□ -2.3
SDC3O75056 RNU7-149P-201ENST00000516739 59 ntBASIC0.68□□□□□ -2.3
SDC3O75056 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC0.68□□□□□ -2.3
SDC3O75056 MIR4680-201ENST00000580906 66 ntBASIC0.68□□□□□ -2.3
SDC3O75056 AC025627.3-201ENST00000582078 182 ntBASIC0.68□□□□□ -2.3
SDC3O75056 AC068700.1-201ENST00000565862 3754 ntBASIC0.68□□□□□ -2.3
SDC3O75056 UBE2WP1-201ENST00000362030 340 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MIR367-201ENST00000362299 68 ntBASIC0.67□□□□□ -2.3
SDC3O75056 Y_RNA.168-201ENST00000363740 102 ntBASIC0.67□□□□□ -2.3
SDC3O75056 Y_RNA.210-201ENST00000364161 110 ntBASIC0.67□□□□□ -2.3
SDC3O75056 RNU6-654P-201ENST00000364373 107 ntBASIC0.67□□□□□ -2.3
SDC3O75056 RNU6-396P-201ENST00000365369 105 ntBASIC0.67□□□□□ -2.3
SDC3O75056 RNU6-514P-201ENST00000384208 107 ntBASIC0.67□□□□□ -2.3
SDC3O75056 Y_RNA.527-201ENST00000384573 102 ntBASIC0.67□□□□□ -2.3
SDC3O75056 Y_RNA.547-201ENST00000384654 119 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MIR215-201ENST00000384858 110 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MIR526A2-201ENST00000390198 65 ntBASIC0.67□□□□□ -2.3
SDC3O75056 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
SDC3O75056 RPL21P38-201ENST00000418090 167 ntBASIC0.67□□□□□ -2.3
SDC3O75056 RNY3P15-201ENST00000516297 97 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MIR4724-201ENST00000579485 89 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MIR4662B-201ENST00000579498 81 ntBASIC0.67□□□□□ -2.3
SDC3O75056 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC0.67□□□□□ -2.3
SDC3O75056 MTND1P7-201ENST00000632801 297 ntBASIC0.67□□□□□ -2.3
SDC3O75056 HSBP1P2-201ENST00000299671 229 ntBASIC0.66□□□□□ -2.3
SDC3O75056 SNORA24-201ENST00000384096 131 ntBASIC0.66□□□□□ -2.3
SDC3O75056 MT-TN-201ENST00000387400 73 ntBASIC0.66□□□□□ -2.3
SDC3O75056 MIR936-201ENST00000401264 98 ntBASIC0.66□□□□□ -2.3
SDC3O75056 MIR548O-201ENST00000408583 114 ntBASIC0.66□□□□□ -2.3
SDC3O75056 BTF3P11-201ENST00000426582 477 ntBASIC0.66□□□□□ -2.3
SDC3O75056 AC005534.2-201ENST00000431047 433 ntBASIC0.66□□□□□ -2.3
SDC3O75056 AC067940.1-201ENST00000458411 300 ntBASIC0.66□□□□□ -2.3
SDC3O75056 SNORD77.4-201ENST00000516158 81 ntBASIC0.66□□□□□ -2.3
SDC3O75056 RNU7-25P-201ENST00000516544 62 ntBASIC0.66□□□□□ -2.3
SDC3O75056 AP003733.2-201ENST00000529409 171 ntBASIC0.66□□□□□ -2.3
SDC3O75056 MIR548AO-201ENST00000579992 96 ntBASIC0.66□□□□□ -2.3
SDC3O75056 RNU6-94P-201ENST00000607728 107 ntBASIC0.66□□□□□ -2.3
SDC3O75056 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC0.66□□□□□ -2.3
SDC3O75056 AL136317.1-201ENST00000612653 226 ntBASIC0.66□□□□□ -2.3
SDC3O75056 MIR377-201ENST00000362145 69 ntBASIC0.65□□□□□ -2.31
SDC3O75056 RNU6-797P-201ENST00000363101 109 ntBASIC0.65□□□□□ -2.31
SDC3O75056 Y_RNA.202-201ENST00000364083 110 ntBASIC0.65□□□□□ -2.31
SDC3O75056 RNU6-806P-201ENST00000365147 105 ntBASIC0.65□□□□□ -2.31
SDC3O75056 RNU6-1335P-201ENST00000365426 107 ntBASIC0.65□□□□□ -2.31
SDC3O75056 RNU6-662P-201ENST00000384253 104 ntBASIC0.65□□□□□ -2.31
SDC3O75056 RNU6-110P-201ENST00000384508 104 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 195.8 ms