Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.77□□□□□ -1.97
SOX1O00570 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.77□□□□□ -1.97
SOX1O00570 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX1O00570 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
SOX1O00570 Y_RNA.241-201ENST00000364470 117 ntBASIC2.77□□□□□ -1.97
SOX1O00570 MIR518E-201ENST00000385252 88 ntBASIC2.77□□□□□ -1.97
SOX1O00570 MIR1912-201ENST00000410389 80 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RNA5SP274-201ENST00000410484 108 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RN7SKP200-201ENST00000410564 320 ntBASIC2.77□□□□□ -1.97
SOX1O00570 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX1O00570 SNX2P2-201ENST00000424553 323 ntBASIC2.77□□□□□ -1.97
SOX1O00570 AC015922.2-201ENST00000435593 184 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RPS12P2-201ENST00000439728 269 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RPL39P25-201ENST00000449384 154 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RNU7-96P-201ENST00000459535 64 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RNU6-904P-201ENST00000516206 101 ntBASIC2.77□□□□□ -1.97
SOX1O00570 RNU7-6P-201ENST00000516845 62 ntBASIC2.77□□□□□ -1.97
SOX1O00570 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.77□□□□□ -1.97
SOX1O00570 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.77□□□□□ -1.97
SOX1O00570 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC2.77□□□□□ -1.97
SOX1O00570 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX1O00570 MIR302B-201ENST00000362188 73 ntBASIC2.76□□□□□ -1.97
SOX1O00570 SNORA46-201ENST00000384762 135 ntBASIC2.76□□□□□ -1.97
SOX1O00570 MTATP8P2-201ENST00000435212 202 ntBASIC2.76□□□□□ -1.97
SOX1O00570 AC104389.3-201ENST00000445629 235 ntBASIC2.76□□□□□ -1.97
SOX1O00570 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.76□□□□□ -1.97
SOX1O00570 RNU6-998P-201ENST00000515894 101 ntBASIC2.76□□□□□ -1.97
SOX1O00570 SNORA31.10-201ENST00000516482 106 ntBASIC2.76□□□□□ -1.97
SOX1O00570 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX1O00570 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.76□□□□□ -1.97
SOX1O00570 MAPK10-266ENST00000641066 6555 ntBASIC2.76□□□□□ -1.97
SOX1O00570 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SOX1O00570 AL442644.1-201ENST00000454390 3105 ntBASIC2.75□□□□□ -1.97
SOX1O00570 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-34-201ENST00000362441 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-12-201ENST00000362583 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-29-201ENST00000362834 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-9-201ENST00000362912 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-21-201ENST00000362963 81 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-14-201ENST00000363090 81 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-13-201ENST00000363358 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-41-201ENST00000363608 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-11-201ENST00000363616 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-5-201ENST00000363633 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-39-201ENST00000363694 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-4-201ENST00000363810 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-16-201ENST00000363887 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-6-201ENST00000363942 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORA25.6-201ENST00000364121 118 ntBASIC2.75□□□□□ -1.97
SOX1O00570 Y_RNA.220-201ENST00000364244 109 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-42-201ENST00000364273 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORA63D-201ENST00000364359 132 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-15-201ENST00000364809 81 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-1-201ENST00000364961 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-26-201ENST00000365067 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-10-201ENST00000365073 81 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-43-201ENST00000365503 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-36-201ENST00000365629 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 RNU6-950P-201ENST00000384651 107 ntBASIC2.75□□□□□ -1.97
SOX1O00570 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SOX1O00570 SNORA26.2-201ENST00000390922 122 ntBASIC2.75□□□□□ -1.97
SOX1O00570 AL034345.1-201ENST00000407768 123 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORA19.1-201ENST00000410656 129 ntBASIC2.75□□□□□ -1.97
SOX1O00570 ATP6V0E1P1-201ENST00000412537 226 ntBASIC2.75□□□□□ -1.97
SOX1O00570 AC092427.1-202ENST00000430569 476 ntBASIC2.75□□□□□ -1.97
SOX1O00570 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.75□□□□□ -1.97
SOX1O00570 RN7SL633P-201ENST00000488974 297 ntBASIC2.75□□□□□ -1.97
SOX1O00570 AC234781.5-201ENST00000508429 271 ntBASIC2.75□□□□□ -1.97
SOX1O00570 AC141557.1-201ENST00000540982 400 ntBASIC2.75□□□□□ -1.97
SOX1O00570 SNORD115-40-201ENST00000606510 82 ntBASIC2.75□□□□□ -1.97
SOX1O00570 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SOX1O00570 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX1O00570 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SOX1O00570 RNU6-833P-201ENST00000363486 107 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNU4-16P-201ENST00000364737 141 ntBASIC2.74□□□□□ -1.97
SOX1O00570 MIR488-201ENST00000365739 83 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNU6-816P-201ENST00000390914 107 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNU6-1268P-201ENST00000391214 107 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNU6-1239P-201ENST00000391310 107 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNY4P29-201ENST00000410801 97 ntBASIC2.74□□□□□ -1.97
SOX1O00570 RNA5SP144-201ENST00000410846 116 ntBASIC2.74□□□□□ -1.97
SOX1O00570 AL022718.1-201ENST00000412004 84 ntBASIC2.74□□□□□ -1.97
SOX1O00570 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC2.74□□□□□ -1.97
SOX1O00570 IGLV3-17-201ENST00000519099 244 ntBASIC2.74□□□□□ -1.97
SOX1O00570 MIR3126-201ENST00000577443 74 ntBASIC2.74□□□□□ -1.97
SOX1O00570 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC2.74□□□□□ -1.97
SOX1O00570 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.74□□□□□ -1.97
SOX1O00570 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SOX1O00570 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SOX1O00570 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
SOX1O00570 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
SOX1O00570 Y_RNA.93-201ENST00000363066 109 ntBASIC2.73□□□□□ -1.97
SOX1O00570 MIR1267-201ENST00000408723 78 ntBASIC2.73□□□□□ -1.97
SOX1O00570 RPS3AP1-201ENST00000413190 320 ntBASIC2.73□□□□□ -1.97
SOX1O00570 AC108667.1-201ENST00000428618 249 ntBASIC2.73□□□□□ -1.97
SOX1O00570 snoU13.18-201ENST00000459483 104 ntBASIC2.73□□□□□ -1.97
SOX1O00570 AC107297.1-201ENST00000459991 176 ntBASIC2.73□□□□□ -1.97
SOX1O00570 AC003982.1-202ENST00000469928 248 ntBASIC2.73□□□□□ -1.97
SOX1O00570 RNA5SP380-201ENST00000517190 98 ntBASIC2.73□□□□□ -1.97
SOX1O00570 IGHVII-40-1-201ENST00000517316 58 ntBASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 201.9 ms