Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC087685.1-201ENST00000587507 141 ntBASIC1.86□□□□□ -2.11
FOXN3O00409 Pinc.1-201ENST00000616452 154 ntBASIC1.86□□□□□ -2.11
FOXN3O00409 AC132825.6-201ENST00000638861 357 ntBASIC1.86□□□□□ -2.11
FOXN3O00409 RNY3P5-201ENST00000384127 102 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 Y_RNA.568-201ENST00000384742 113 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 MIR583-201ENST00000384846 75 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 RNU6-460P-201ENST00000391158 108 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 MIR513C-201ENST00000401352 84 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AL161935.2-201ENST00000414627 60 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 SNORD77.4-201ENST00000516158 81 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 RNU6-197P-201ENST00000516680 100 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AC112693.2-201ENST00000556538 232 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AC024614.2-201ENST00000577584 372 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.85□□□□□ -2.11
FOXN3O00409 MIR548X2-201ENST00000579776 100 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 MIR3618-201ENST00000580330 88 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AP001485.1-201ENST00000604799 199 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.85□□□□□ -2.11
FOXN3O00409 MIR6844-201ENST00000637122 62 ntBASIC1.85□□□□□ -2.11
FOXN3O00409 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
FOXN3O00409 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.84□□□□□ -2.11
FOXN3O00409 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
FOXN3O00409 MIRLET7C-201ENST00000362160 84 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 RNU6-1082P-201ENST00000364574 107 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 MIR891A-201ENST00000401237 79 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 RNU6-257P-201ENST00000410238 98 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 CYCTP-201ENST00000504253 315 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 RNU6-970P-201ENST00000516312 107 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 SNORD45.4-201ENST00000516629 73 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 MIR378D2-201ENST00000580636 98 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
FOXN3O00409 RNU6-457P-201ENST00000363999 107 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 Y_RNA.634-201ENST00000364811 113 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 snoU2-30.1-201ENST00000365012 70 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 Y_RNA.393-201ENST00000383936 102 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 Y_RNA.420-201ENST00000384043 110 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 Y_RNA.486-201ENST00000384398 107 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 RNU4-43P-201ENST00000410628 137 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 RNU6-1270P-201ENST00000517128 108 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.83□□□□□ -2.12
FOXN3O00409 MIR3937-201ENST00000580135 106 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 AC027279.3-201ENST00000625055 122 ntBASIC1.83□□□□□ -2.12
FOXN3O00409 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
FOXN3O00409 SNORD14E-201ENST00000364009 85 ntBASIC1.82□□□□□ -2.12
FOXN3O00409 SNORD50B-201ENST00000364995 70 ntBASIC1.82□□□□□ -2.12
FOXN3O00409 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXN3O00409 AC092991.1-201ENST00000477176 376 ntBASIC1.82□□□□□ -2.12
FOXN3O00409 MIR8081-201ENST00000611533 95 ntBASIC1.82□□□□□ -2.12
FOXN3O00409 MIR6845-201ENST00000613182 61 ntBASIC1.82□□□□□ -2.12
FOXN3O00409 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXN3O00409 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.82□□□□□ -2.12
FOXN3O00409 AC010332.2-201ENST00000613083 1904 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 RNU6-978P-201ENST00000364371 103 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 Y_RNA.242-201ENST00000364473 110 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 RNU6-482P-201ENST00000391068 107 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.81□□□□□ -2.12
FOXN3O00409 AC079140.2-201ENST00000506193 142 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 RNU6-250P-201ENST00000516958 103 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 AC015688.6-201ENST00000577737 104 ntBASIC1.81□□□□□ -2.12
FOXN3O00409 AP000648.3-201ENST00000623539 4507 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 RNU6-833P-201ENST00000363486 107 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 SNORD1A-201ENST00000364968 72 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 MIR516B2-201ENST00000385190 85 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 Y_RNA.586-201ENST00000391146 98 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 MTND4LP9-201ENST00000427694 174 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 Y_RNA.666-201ENST00000516187 112 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 RNU6-971P-201ENST00000516920 106 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 AC008507.4-201ENST00000585464 127 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC1.8□□□□□ -2.12
FOXN3O00409 SNORD50.2-201ENST00000365465 70 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 Y_RNA.542-201ENST00000384641 111 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 SNORA75.5-201ENST00000391291 81 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 AL603825.1-201ENST00000438481 80 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 RNU7-197P-201ENST00000458836 62 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 RNU6-922P-201ENST00000516753 99 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 RNU6-548P-201ENST00000517083 115 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 AC090142.3-201ENST00000519012 385 ntBASIC1.79□□□□□ -2.12
FOXN3O00409 Y_RNA.66-201ENST00000362862 102 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 Y_RNA.294-201ENST00000364916 102 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 RNU6-1138P-201ENST00000365359 106 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 RNU2-55P-201ENST00000411146 174 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC1.78□□□□□ -2.12
FOXN3O00409 RNU6-1211P-201ENST00000459179 105 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 RNU6-365P-201ENST00000517113 106 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 AC007751.1-201ENST00000529260 376 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 MIR3129-201ENST00000581095 76 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 FAM106DP-201ENST00000586416 501 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 AL353997.5-201ENST00000618886 171 ntBASIC1.78□□□□□ -2.12
FOXN3O00409 SNORA25.7-201ENST00000364375 127 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 RNU6-915P-201ENST00000364943 103 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 Y_RNA.336-201ENST00000365307 109 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 SNORA1-201ENST00000384107 130 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 SNORD61-201ENST00000384252 73 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 SNORA40-201ENST00000388090 126 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 HMGN2P32-201ENST00000444648 269 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 RNA5SP153-201ENST00000516498 76 ntBASIC1.77□□□□□ -2.13
FOXN3O00409 RNU6-126P-201ENST00000516685 103 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms