Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 Y_RNA.483-201ENST00000384380 101 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA75.2-201ENST00000391138 150 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA75.3-201ENST00000391231 150 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR1185-1-201ENST00000408598 86 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC002429.1-201ENST00000437672 148 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 HMGN2P32-201ENST00000444648 269 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU4-57P-201ENST00000515980 135 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-351P-201ENST00000516097 100 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RN7SKP164-201ENST00000516138 266 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD111.1-201ENST00000516421 86 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA18.7-201ENST00000516910 131 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 SCARNA24.2-201ENST00000516968 130 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 DEFB108E-201ENST00000524692 240 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR4643-201ENST00000577473 78 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR4764-201ENST00000580680 88 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR2681-201ENST00000581814 105 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL512605.2-201ENST00000592972 256 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 BX284668.6-201ENST00000606899 438 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR8062-201ENST00000621515 85 ntBASIC0.76□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-1205P-201ENST00000363625 106 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-211P-201ENST00000384047 107 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL358176.2-201ENST00000425769 204 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 BTF3P11-201ENST00000426582 477 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD2.1-201ENST00000458762 69 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU7-21P-201ENST00000459430 62 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 MTCO2P24-201ENST00000515611 426 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU2-13P-201ENST00000515909 113 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA70.22-201ENST00000517160 124 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC007751.1-201ENST00000529260 376 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL117187.1-201ENST00000555482 181 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR4282-201ENST00000583613 67 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL590095.2-201ENST00000604136 117 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR6779-201ENST00000617283 64 ntBASIC0.75□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR335-201ENST00000362173 94 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA25.1-201ENST00000362326 128 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNA5SP264-201ENST00000363115 107 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-740P-201ENST00000364734 105 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-1138P-201ENST00000365359 106 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-1289P-201ENST00000384431 106 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR568-201ENST00000385036 95 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR526A2-201ENST00000390198 65 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA53-201ENST00000391141 249 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 AL392103.1-201ENST00000447000 198 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-1132P-201ENST00000459214 107 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 TRBVB-201ENST00000477100 408 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-635P-201ENST00000516651 102 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR4714-201ENST00000580728 77 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC011921.3-201ENST00000605540 361 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 JPX_2.1-201ENST00000614161 69 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 uc_338.4-201ENST00000616635 176 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR6513-201ENST00000621188 64 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.74□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC008163.1-202ENST00000636004 2889 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.82-201ENST00000363000 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.92-201ENST00000363043 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.145-201ENST00000363527 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD14E-201ENST00000364009 85 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.235-201ENST00000364412 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.306-201ENST00000365015 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.312-201ENST00000365089 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.322-201ENST00000365151 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.396-201ENST00000383949 103 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-442P-201ENST00000383968 104 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.494-201ENST00000384432 111 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.574-201ENST00000384766 95 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR520C-201ENST00000385005 87 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR626-201ENST00000385032 94 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD12-201ENST00000391002 90 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNA5SP496-201ENST00000391240 109 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 MTND4LP30-201ENST00000454092 297 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.650-201ENST00000459002 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNA5SP436-201ENST00000516020 115 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORD77.4-201ENST00000516158 81 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU7-149P-201ENST00000516739 59 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.777-201ENST00000516982 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.714-201ENST00000517065 90 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.771-201ENST00000598668 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Pinc.1-201ENST00000616452 154 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC007742.2-201ENST00000618226 398 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.789-201ENST00000622480 102 ntBASIC0.73□□□□□ -2.29
TMX2-CTNND1H3BSU7 SNORA25.3-201ENST00000363205 127 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.133-201ENST00000363428 110 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.486-201ENST00000384398 107 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 MIR548A2-201ENST00000384956 97 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 Y_RNA.587-201ENST00000391210 103 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 U8.17-201ENST00000391292 132 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU6-938P-201ENST00000411285 103 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 SCARNA8-201ENST00000515924 131 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 SCARNA15.1-201ENST00000516384 125 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 RNU7-43P-201ENST00000516554 64 ntBASIC0.72□□□□□ -2.29
TMX2-CTNND1H3BSU7 AC100767.1-201ENST00000528178 123 ntBASIC0.72□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 187.9 ms