Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC1.58□□□□□ -2.16
Q9N2J8 AC006441.5-201ENST00000612680 209 ntBASIC1.58□□□□□ -2.16
Q9N2J8 AC106754.2-201ENST00000623006 233 ntBASIC1.58□□□□□ -2.16
Q9N2J8 WWP1P1-201ENST00000466609 2769 ntBASIC1.57□□□□□ -2.16
Q9N2J8 SNORD33-201ENST00000362761 85 ntBASIC1.57□□□□□ -2.16
Q9N2J8 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
Q9N2J8 RNU6-268P-201ENST00000364174 107 ntBASIC1.57□□□□□ -2.16
Q9N2J8 Y_RNA.486-201ENST00000384398 107 ntBASIC1.57□□□□□ -2.16
Q9N2J8 SNORA26.9-201ENST00000391322 122 ntBASIC1.57□□□□□ -2.16
Q9N2J8 SNRPGP14-201ENST00000435400 219 ntBASIC1.57□□□□□ -2.16
Q9N2J8 AC015922.2-201ENST00000435593 184 ntBASIC1.57□□□□□ -2.16
Q9N2J8 RNU6-561P-201ENST00000516222 102 ntBASIC1.57□□□□□ -2.16
Q9N2J8 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.57□□□□□ -2.16
Q9N2J8 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.57□□□□□ -2.16
Q9N2J8 U6.106-201ENST00000636360 105 ntBASIC1.57□□□□□ -2.16
Q9N2J8 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
Q9N2J8 MIR302D-201ENST00000362275 68 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU6-312P-201ENST00000364629 107 ntBASIC1.56□□□□□ -2.16
Q9N2J8 SNORA2.2-201ENST00000365473 135 ntBASIC1.56□□□□□ -2.16
Q9N2J8 MIR136-201ENST00000385207 82 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU2-64P-201ENST00000411315 191 ntBASIC1.56□□□□□ -2.16
Q9N2J8 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.56□□□□□ -2.16
Q9N2J8 AC079140.2-201ENST00000506193 142 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU6-322P-201ENST00000516010 103 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU6-1219P-201ENST00000516143 112 ntBASIC1.56□□□□□ -2.16
Q9N2J8 SNORA25.15-201ENST00000516487 89 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU6-197P-201ENST00000516680 100 ntBASIC1.56□□□□□ -2.16
Q9N2J8 RNU6-250P-201ENST00000516958 103 ntBASIC1.56□□□□□ -2.16
Q9N2J8 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Q9N2J8 AC097639.2-201ENST00000603159 172 ntBASIC1.56□□□□□ -2.16
Q9N2J8 Y_RNA.23-201ENST00000362496 106 ntBASIC1.55□□□□□ -2.16
Q9N2J8 Y_RNA.634-201ENST00000364811 113 ntBASIC1.55□□□□□ -2.16
Q9N2J8 SNORD48-201ENST00000364953 64 ntBASIC1.55□□□□□ -2.16
Q9N2J8 MIR526A1-201ENST00000384897 85 ntBASIC1.55□□□□□ -2.16
Q9N2J8 MIR934-201ENST00000401241 83 ntBASIC1.55□□□□□ -2.16
Q9N2J8 MIR1289-2-201ENST00000408360 111 ntBASIC1.55□□□□□ -2.16
Q9N2J8 SNRPGP13-201ENST00000442212 177 ntBASIC1.55□□□□□ -2.16
Q9N2J8 AC092991.1-201ENST00000477176 376 ntBASIC1.55□□□□□ -2.16
Q9N2J8 RNU6-504P-201ENST00000516568 104 ntBASIC1.55□□□□□ -2.16
Q9N2J8 AC090142.3-201ENST00000519012 385 ntBASIC1.55□□□□□ -2.16
Q9N2J8 SNORD1A-201ENST00000364968 72 ntBASIC1.54□□□□□ -2.16
Q9N2J8 SNORD24-201ENST00000383884 75 ntBASIC1.54□□□□□ -2.16
Q9N2J8 MIR516B2-201ENST00000385190 85 ntBASIC1.54□□□□□ -2.16
Q9N2J8 MIR653-201ENST00000385279 96 ntBASIC1.54□□□□□ -2.16
Q9N2J8 AL627390.1-201ENST00000396055 340 ntBASIC1.54□□□□□ -2.16
Q9N2J8 MIR548O-201ENST00000408583 114 ntBASIC1.54□□□□□ -2.16
Q9N2J8 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.54□□□□□ -2.16
Q9N2J8 Y_RNA.662-201ENST00000516028 97 ntBASIC1.54□□□□□ -2.16
Q9N2J8 Y_RNA.666-201ENST00000516187 112 ntBASIC1.54□□□□□ -2.16
Q9N2J8 RNU6-861P-201ENST00000516745 106 ntBASIC1.54□□□□□ -2.16
Q9N2J8 AC090049.2-201ENST00000550377 109 ntBASIC1.54□□□□□ -2.16
Q9N2J8 MIR4422-201ENST00000581938 83 ntBASIC1.54□□□□□ -2.16
Q9N2J8 FAM106DP-201ENST00000586416 501 ntBASIC1.54□□□□□ -2.16
Q9N2J8 AC098479.1-201ENST00000609225 154 ntBASIC1.54□□□□□ -2.16
Q9N2J8 MIR8081-201ENST00000611533 95 ntBASIC1.54□□□□□ -2.16
Q9N2J8 Y_RNA.91-201ENST00000363042 107 ntBASIC1.53□□□□□ -2.16
Q9N2J8 RNU6-682P-201ENST00000363843 106 ntBASIC1.53□□□□□ -2.16
Q9N2J8 Y_RNA.240-201ENST00000364469 95 ntBASIC1.53□□□□□ -2.16
Q9N2J8 RNU6-643P-201ENST00000384018 107 ntBASIC1.53□□□□□ -2.16
Q9N2J8 RNU6-1065P-201ENST00000384513 106 ntBASIC1.53□□□□□ -2.16
Q9N2J8 AL451046.2-201ENST00000403074 277 ntBASIC1.53□□□□□ -2.16
Q9N2J8 RNU6-917P-201ENST00000516294 104 ntBASIC1.53□□□□□ -2.16
Q9N2J8 RNU6-830P-201ENST00000516353 107 ntBASIC1.53□□□□□ -2.16
Q9N2J8 MIR4255-201ENST00000579351 72 ntBASIC1.53□□□□□ -2.16
Q9N2J8 MIR4431-201ENST00000579990 94 ntBASIC1.53□□□□□ -2.16
Q9N2J8 AL365434.2-201ENST00000607979 234 ntBASIC1.53□□□□□ -2.16
Q9N2J8 AC015726.2-201ENST00000620112 122 ntBASIC1.53□□□□□ -2.16
Q9N2J8 Y_RNA.66-201ENST00000362862 102 ntBASIC1.52□□□□□ -2.17
Q9N2J8 RNU6-907P-201ENST00000390924 102 ntBASIC1.52□□□□□ -2.17
Q9N2J8 SNX2P2-201ENST00000424553 323 ntBASIC1.52□□□□□ -2.17
Q9N2J8 AC005840.1-201ENST00000498412 377 ntBASIC1.52□□□□□ -2.17
Q9N2J8 AC019176.1-201ENST00000518519 225 ntBASIC1.52□□□□□ -2.17
Q9N2J8 MIR3937-201ENST00000580135 106 ntBASIC1.52□□□□□ -2.17
Q9N2J8 AL513534.2-201ENST00000603836 250 ntBASIC1.52□□□□□ -2.17
Q9N2J8 AL442644.1-201ENST00000454390 3105 ntBASIC1.52□□□□□ -2.17
Q9N2J8 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.52□□□□□ -2.17
Q9N2J8 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Q9N2J8 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Q9N2J8 RNU6-888P-201ENST00000363010 101 ntBASIC1.51□□□□□ -2.17
Q9N2J8 Y_RNA.270-201ENST00000364693 104 ntBASIC1.51□□□□□ -2.17
Q9N2J8 MIR504-201ENST00000385065 83 ntBASIC1.51□□□□□ -2.17
Q9N2J8 RNU1-78P-201ENST00000391248 165 ntBASIC1.51□□□□□ -2.17
Q9N2J8 AC027119.1-201ENST00000440877 241 ntBASIC1.51□□□□□ -2.17
Q9N2J8 AC107027.2-201ENST00000512197 115 ntBASIC1.51□□□□□ -2.17
Q9N2J8 RNU6-693P-201ENST00000516134 107 ntBASIC1.51□□□□□ -2.17
Q9N2J8 RNU7-25P-201ENST00000516544 62 ntBASIC1.51□□□□□ -2.17
Q9N2J8 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
Q9N2J8 MIR3683-201ENST00000580847 82 ntBASIC1.51□□□□□ -2.17
Q9N2J8 MIR4285-201ENST00000581001 85 ntBASIC1.51□□□□□ -2.17
Q9N2J8 FTX_2.1-201ENST00000618816 94 ntBASIC1.51□□□□□ -2.17
Q9N2J8 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.51□□□□□ -2.17
Q9N2J8 Y_RNA.357-201ENST00000365487 109 ntBASIC1.5□□□□□ -2.17
Q9N2J8 SNORD61-201ENST00000384252 73 ntBASIC1.5□□□□□ -2.17
Q9N2J8 Y_RNA.547-201ENST00000384654 119 ntBASIC1.5□□□□□ -2.17
Q9N2J8 AC006461.1-201ENST00000412637 326 ntBASIC1.5□□□□□ -2.17
Q9N2J8 SEPT7P4-201ENST00000437076 306 ntBASIC1.5□□□□□ -2.17
Q9N2J8 AC245517.4-201ENST00000448601 281 ntBASIC1.5□□□□□ -2.17
Q9N2J8 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC1.5□□□□□ -2.17
Q9N2J8 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.5□□□□□ -2.17
Q9N2J8 RNA5SP445-201ENST00000515889 115 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms