Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL035398.1-201ENST00000430869 322 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 PDCD5P2-201ENST00000507570 312 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 ACA64.5-201ENST00000516207 127 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 SNORA27.4-201ENST00000516650 95 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 RNU6-197P-201ENST00000516680 100 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 RNU7-181P-201ENST00000517234 74 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 AC007751.1-201ENST00000529260 376 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 AP003733.2-201ENST00000529409 171 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 snoU13.31-201ENST00000607291 104 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 MIR6715A-201ENST00000615929 79 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 MIR4251-201ENST00000635819 61 ntBASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC0.63□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1205P-201ENST00000363625 106 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1335P-201ENST00000365426 107 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 SNORA24-201ENST00000384096 131 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 RNU6-662P-201ENST00000384253 104 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.494-201ENST00000384432 111 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.537-201ENST00000384626 109 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.547-201ENST00000384654 119 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MIR570-201ENST00000384917 97 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.587-201ENST00000391210 103 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 RNU6-613P-201ENST00000410412 108 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MTND5P22-201ENST00000458380 195 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MTCO2P24-201ENST00000515611 426 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MIR548AO-201ENST00000579992 96 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 AC211469.2-201ENST00000605461 205 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 uc_338.4-201ENST00000616635 176 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 snoU18.1-201ENST00000629629 71 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MIR6767-201ENST00000637302 66 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 MIR6866-201ENST00000638146 69 ntBASIC0.62□□□□□ -2.31
HDHD3Q9BSH5 RNU6-392P-201ENST00000364926 101 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1227P-201ENST00000383981 107 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR608-201ENST00000384820 100 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR548A2-201ENST00000384956 97 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR100-201ENST00000385259 80 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR526A2-201ENST00000390198 65 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNA5SP496-201ENST00000391240 109 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1203P-201ENST00000410703 110 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 AC092473.1-201ENST00000441098 221 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 AL731563.1-201ENST00000442202 214 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 SNORD77.4-201ENST00000516158 81 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNY3P15-201ENST00000516297 97 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNU7-25P-201ENST00000516544 62 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 RNU7-149P-201ENST00000516739 59 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 SNORA40.15-201ENST00000516884 107 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 AC023827.1-201ENST00000569247 97 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR4791-201ENST00000607666 84 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR6857-201ENST00000613267 93 ntBASIC0.61□□□□□ -2.31
HDHD3Q9BSH5 MIR373-201ENST00000362273 69 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-369P-201ENST00000362515 102 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-580P-201ENST00000365159 107 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.370-201ENST00000365589 108 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MIR605-201ENST00000385078 83 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MIR942-201ENST00000401111 86 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-938P-201ENST00000411285 103 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MTND5P15-201ENST00000434246 349 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MTND4LP30-201ENST00000454092 297 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 SERF1AP1-201ENST00000514575 187 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1143P-201ENST00000516125 104 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1338P-201ENST00000516328 91 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 RNU6-1153P-201ENST00000516760 105 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 DEFB108E-201ENST00000524692 240 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MIR5688-201ENST00000580619 83 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 AL356055.1-201ENST00000602528 446 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 AP001282.2-201ENST00000616149 309 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 MTND1P7-201ENST00000632801 297 ntBASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.6□□□□□ -2.31
HDHD3Q9BSH5 SNORD45.3-201ENST00000363836 72 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.202-201ENST00000364083 110 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 RNU4-10P-201ENST00000364383 140 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.330-201ENST00000365230 109 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.486-201ENST00000384398 107 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 Y_RNA.572-201ENST00000384757 98 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 RPS3AP1-201ENST00000413190 320 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 BTF3P11-201ENST00000426582 477 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 FABP5P4-201ENST00000437203 171 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 PSMC1P5-201ENST00000512850 177 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 RNA5SP458-201ENST00000516188 119 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 RNU6-113P-201ENST00000516653 101 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 MIR4653-201ENST00000585107 83 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 AL512605.2-201ENST00000592972 256 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 AL049861.1-201ENST00000603130 150 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 AL353765.1-201ENST00000605514 183 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 AL359821.1-201ENST00000605519 182 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 AC015726.2-201ENST00000620112 122 ntBASIC0.59□□□□□ -2.31
HDHD3Q9BSH5 SNORA25.1-201ENST00000362326 128 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 Y_RNA.242-201ENST00000364473 110 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 SNORD113.3-201ENST00000364630 78 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 Y_RNA.275-201ENST00000364726 110 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 Y_RNA.518-201ENST00000384552 113 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 SNORA53-201ENST00000391141 249 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 RNU6-1109P-201ENST00000391187 107 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 SNORD111-201ENST00000408139 94 ntBASIC0.58□□□□□ -2.32
HDHD3Q9BSH5 MIR548O-201ENST00000408583 114 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms