Protein–RNA interactions for Protein: Q9BR11

ZSWIM1, Zinc finger SWIM domain-containing protein 1, humanhuman

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM1Q9BR11 Y_RNA.127-201ENST00000363386 109 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.265-201ENST00000364677 108 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.280-201ENST00000364765 112 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 snoU2-30.1-201ENST00000365012 70 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.336-201ENST00000365307 109 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-442P-201ENST00000383968 104 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 SNORA1-201ENST00000384107 130 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-80P-201ENST00000384195 107 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU4-52P-201ENST00000384209 138 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-950P-201ENST00000384651 107 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1154P-201ENST00000391001 104 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 MIR891A-201ENST00000401237 79 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP270-201ENST00000411361 118 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.666-201ENST00000516187 112 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 SNORA31.25-201ENST00000517242 134 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 RNU2-60P-201ENST00000517290 128 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 MIR4448-201ENST00000584360 86 ntBASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ZSWIM1Q9BR11 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 AC092881.1-201ENST00000638218 2733 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 SNORD14E-201ENST00000364009 85 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 SNORA22C-201ENST00000384614 134 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 MIR518F-201ENST00000384973 87 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 RN7SKP200-201ENST00000410564 320 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP501-201ENST00000410990 112 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 STAG3L5P-204ENST00000443759 179 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 HMGN2P32-201ENST00000444648 269 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 SNORD45.4-201ENST00000516629 73 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP364-201ENST00000516938 78 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 AC027279.3-201ENST00000625055 122 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 ZNF355P-201ENST00000427301 3216 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 AC245060.5-201ENST00000610778 3293 ntBASIC2.06□□□□□ -2.08
ZSWIM1Q9BR11 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.52-201ENST00000362760 96 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 U8.1-201ENST00000362843 134 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 SNORA3A-201ENST00000364113 130 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP205-201ENST00000364653 136 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-296P-201ENST00000384608 107 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 MIR520A-201ENST00000384862 85 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 AL603914.1-201ENST00000401964 204 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 AL158823.1-201ENST00000418441 478 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 HSPE1P9-201ENST00000440046 311 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-693P-201ENST00000516134 107 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 SNORA18.4-201ENST00000516440 124 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.686-201ENST00000516548 134 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1270P-201ENST00000517128 108 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 AC011603.4-201ENST00000611325 277 ntBASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC2.05□□□□□ -2.08
ZSWIM1Q9BR11 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 SNORD114-1-201ENST00000362705 72 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-112P-201ENST00000363599 104 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-268P-201ENST00000364174 107 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP450-201ENST00000411206 102 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 AC003989.2-201ENST00000440224 169 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1211P-201ENST00000459179 105 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 CYCTP-201ENST00000504253 315 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP437-201ENST00000517249 129 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 MIR3129-201ENST00000581095 76 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 MIR6840-201ENST00000611937 71 ntBASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
ZSWIM1Q9BR11 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1084P-201ENST00000362498 107 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 SNORD77.3-201ENST00000391113 65 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 AL034345.1-201ENST00000407768 123 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 MIR548O-201ENST00000408583 114 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1333P-201ENST00000516162 93 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 RNA5SP236-201ENST00000516169 116 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 RNU6-1234P-201ENST00000516877 103 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 Y_RNA.757-201ENST00000578934 114 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 U1.36-201ENST00000620684 176 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 MIR203B-201ENST00000636080 86 ntBASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.03□□□□□ -2.08
ZSWIM1Q9BR11 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 AL596028.1-201ENST00000326971 197 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 SNORA4.2-201ENST00000365313 147 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RNU6-424P-201ENST00000384367 105 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 MIR802-201ENST00000390235 94 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RNA5SP489-201ENST00000410986 109 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RPS29P11-201ENST00000496507 171 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RNU4-57P-201ENST00000515980 135 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 RNU6-659P-201ENST00000516454 104 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 Y_RNA.692-201ENST00000516627 105 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 MIR4529-201ENST00000578110 78 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 MIR3121-201ENST00000579680 77 ntBASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.02□□□□□ -2.09
ZSWIM1Q9BR11 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
ZSWIM1Q9BR11 Y_RNA.261-201ENST00000364631 102 ntBASIC2.01□□□□□ -2.09
ZSWIM1Q9BR11 Y_RNA.410-201ENST00000383992 113 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 223.6 ms