Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC244098.3-201ENST00000424803 96 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.62□□□□□ -2.31
VMP1Q96GC9 snoU13.18-201ENST00000459483 104 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 RNU6-1170P-201ENST00000515974 106 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 RPL23AP91-201ENST00000569211 455 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 AC005357.1-201ENST00000588399 301 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 AC012433.1-201ENST00000588916 398 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 AC104695.3-201ENST00000604052 296 ntBASIC0.62□□□□□ -2.31
VMP1Q96GC9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.61□□□□□ -2.31
VMP1Q96GC9 RNU6-396P-201ENST00000365369 105 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 Y_RNA.355-201ENST00000365462 98 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 Y_RNA.424-201ENST00000384063 103 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 SNORD72-201ENST00000390994 80 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 SNORA26.5-201ENST00000391215 123 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 U8.17-201ENST00000391292 132 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 SNORD11-201ENST00000459124 84 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.61□□□□□ -2.31
VMP1Q96GC9 RNU6-191P-201ENST00000516295 94 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 RNU6-1046P-201ENST00000516538 107 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 RNU6-1007P-201ENST00000516586 107 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 LARP7P1-201ENST00000605576 316 ntBASIC0.61□□□□□ -2.31
VMP1Q96GC9 SNORD113-8-201ENST00000363497 74 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 Y_RNA.242-201ENST00000364473 110 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 SNORA63.7-201ENST00000365579 123 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 Y_RNA.418-201ENST00000384029 102 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 MTCO2P33-201ENST00000402100 465 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 AL603910.2-201ENST00000407268 136 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 RNA5SP222-201ENST00000411039 105 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 MTND4P19-201ENST00000446659 478 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 AC004812.1-201ENST00000540773 146 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 AC022709.1-201ENST00000615967 87 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 MIR376A1-201ENST00000616574 68 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.6□□□□□ -2.31
VMP1Q96GC9 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.59□□□□□ -2.31
VMP1Q96GC9 MIR369-201ENST00000362155 70 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 SNORD42.2-201ENST00000365570 69 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 RNU6-945P-201ENST00000383947 107 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 Y_RNA.445-201ENST00000384168 102 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 MIR570-201ENST00000384917 97 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 RNA5SP95-201ENST00000410319 137 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 Y_RNA.639-201ENST00000458981 102 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC124312.5-201ENST00000604451 268 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC006441.5-201ENST00000612680 209 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC015726.2-201ENST00000620112 122 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 AC090971.5-201ENST00000621102 293 ntBASIC0.59□□□□□ -2.31
VMP1Q96GC9 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
VMP1Q96GC9 Y_RNA.136-201ENST00000363444 102 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 Y_RNA.168-201ENST00000363740 102 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 Y_RNA.183-201ENST00000363882 113 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU6-899P-201ENST00000363947 107 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 Y_RNA.431-201ENST00000384086 102 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 SNORA51.10-201ENST00000384418 136 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU6-102P-201ENST00000384485 104 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU6-308P-201ENST00000390957 107 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 Y_RNA.645-201ENST00000391229 102 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.58□□□□□ -2.32
VMP1Q96GC9 HSPE1P25-201ENST00000455484 251 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU6-397P-201ENST00000516226 104 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU6-764P-201ENST00000516396 105 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 RNU7-181P-201ENST00000517234 74 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.58□□□□□ -2.32
VMP1Q96GC9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC0.58□□□□□ -2.32
VMP1Q96GC9 AC090574.1-201ENST00000623186 233 ntBASIC0.58□□□□□ -2.32
VMP1Q96GC9 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.57□□□□□ -2.32
VMP1Q96GC9 RNU1-133P-201ENST00000364867 167 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 Y_RNA.354-201ENST00000365448 111 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 SNORA36.2-201ENST00000384004 127 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 Y_RNA.537-201ENST00000384626 109 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 SNORD115-46-201ENST00000390982 71 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 Y_RNA.602-201ENST00000410535 92 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 AC022028.1-201ENST00000412054 408 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 RNU6-496P-201ENST00000516145 99 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 Y_RNA.715-201ENST00000517082 110 ntBASIC0.57□□□□□ -2.32
VMP1Q96GC9 Y_RNA.31-201ENST00000362574 102 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU4-90P-201ENST00000362773 141 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 SNORA1.2-201ENST00000365189 134 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 Y_RNA.376-201ENST00000365638 108 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-144P-201ENST00000383951 107 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 Y_RNA.419-201ENST00000384041 102 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 Y_RNA.569-201ENST00000384749 103 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-1237P-201ENST00000384777 107 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 MIR92A1-201ENST00000385233 78 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-763P-201ENST00000390865 106 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-823P-201ENST00000391042 103 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU4-57P-201ENST00000515980 135 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-897P-201ENST00000517135 105 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC0.56□□□□□ -2.32
VMP1Q96GC9 C8orf59P2-201ENST00000603441 271 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RAC1P9-201ENST00000604990 392 ntBASIC0.56□□□□□ -2.32
VMP1Q96GC9 RNU6-1205P-201ENST00000363625 106 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
VMP1Q96GC9 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC0.55□□□□□ -2.32
VMP1Q96GC9 PMCHL1-202ENST00000423102 261 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 MTCO1P5-201ENST00000433573 344 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 MTATP6P23-201ENST00000440153 476 ntBASIC0.55□□□□□ -2.32
VMP1Q96GC9 MRPS35P2-201ENST00000508242 191 ntBASIC0.55□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 165.3 ms