Protein–RNA interactions for Protein: Q96CU9

FOXRED1, FAD-dependent oxidoreductase domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1Q96CU9 MIR424-201ENST00000362227 98 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 RNU6-647P-201ENST00000364243 107 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 SNORA2.2-201ENST00000365473 135 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 RNU2-60P-201ENST00000517290 128 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 AP003484.1-201ENST00000530974 250 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 AL359881.1-201ENST00000602916 267 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 AL022345.2-201ENST00000606307 135 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 AC005336.3-201ENST00000623833 2679 ntBASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
FOXRED1Q96CU9 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 Y_RNA.114-201ENST00000363265 113 ntBASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 MIR136-201ENST00000385207 82 ntBASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 AL158147.1-201ENST00000443970 75 ntBASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 SNORA18.7-201ENST00000516910 131 ntBASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 AC067747.1-201ENST00000608026 250 ntBASIC2.1□□□□□ -2.07
FOXRED1Q96CU9 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 RNA5SP276-201ENST00000362580 94 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 RNU6-309P-201ENST00000364573 106 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 Y_RNA.261-201ENST00000364631 102 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 RNA5SP205-201ENST00000364653 136 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 Y_RNA.294-201ENST00000364916 102 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 AL627390.1-201ENST00000396055 340 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 AC099513.1-201ENST00000490423 301 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 RNU6-113P-201ENST00000516653 101 ntBASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.09□□□□□ -2.07
FOXRED1Q96CU9 ZNF658B-202ENST00000615961 3375 ntBASIC2.09□□□□□ -2.08
FOXRED1Q96CU9 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
FOXRED1Q96CU9 AL596028.1-201ENST00000326971 197 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 RNU6-1123P-201ENST00000362347 106 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 SNORA1.2-201ENST00000365189 134 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 AC093850.1-201ENST00000454121 251 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 RNU7-80P-201ENST00000459562 61 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 RNA5SP236-201ENST00000516169 116 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 SNORD36C-201ENST00000516733 66 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 SCARNA15-202ENST00000516881 127 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 MIR6817-201ENST00000615588 66 ntBASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.08□□□□□ -2.08
FOXRED1Q96CU9 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AC016717.2-201ENST00000609089 5141 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 RNU6-235P-201ENST00000362644 107 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 RNU6-414P-201ENST00000363705 104 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.440-201ENST00000384120 114 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.454-201ENST00000384224 113 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.500-201ENST00000384466 111 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 SNORA40.5-201ENST00000391061 128 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 MIR1267-201ENST00000408723 78 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AL021397.1-201ENST00000451806 248 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AC107297.1-201ENST00000459991 176 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 RNU6-659P-201ENST00000516454 104 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 RNA5SP24-201ENST00000516478 95 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AC133485.4-201ENST00000561835 220 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AC138907.4-201ENST00000570107 226 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 MIR4778-201ENST00000577635 80 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 DLEU2_5.2-201ENST00000610606 84 ntBASIC2.07□□□□□ -2.08
FOXRED1Q96CU9 AL442644.1-201ENST00000454390 3105 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.241-201ENST00000364470 117 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 MIR516B2-201ENST00000385190 85 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 RNU6-938P-201ENST00000411285 103 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.629-201ENST00000411368 105 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 UBE2DNL-203ENST00000474922 222 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 AC079804.2-201ENST00000490376 200 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 MIR4287-201ENST00000579398 78 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 SNORD53-201ENST00000579969 78 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 MIR4672-201ENST00000583126 81 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 AL773524.1-201ENST00000614065 229 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 MIR1291-201ENST00000627649 87 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 MIR376A2-201ENST00000636782 80 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 ZNF720P1-201ENST00000562403 1939 ntBASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
FOXRED1Q96CU9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 RNU6-1290P-201ENST00000362957 109 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.280-201ENST00000364765 112 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 RNU1-133P-201ENST00000364867 167 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 Y_RNA.351-201ENST00000365436 96 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 U8.17-201ENST00000391292 132 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 AL359511.1-201ENST00000402970 211 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 SNORA59A-201ENST00000459326 152 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 RNA5SP320-201ENST00000516263 124 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 MIR4513-201ENST00000581077 86 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 MIR6852-201ENST00000621699 66 ntBASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
FOXRED1Q96CU9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.04□□□□□ -2.08
FOXRED1Q96CU9 SNORD115-34-201ENST00000362441 82 ntBASIC2.04□□□□□ -2.08
FOXRED1Q96CU9 SNORD115-12-201ENST00000362583 82 ntBASIC2.04□□□□□ -2.08
FOXRED1Q96CU9 SNORD115-29-201ENST00000362834 82 ntBASIC2.04□□□□□ -2.08
FOXRED1Q96CU9 SNORD115-9-201ENST00000362912 82 ntBASIC2.04□□□□□ -2.08
FOXRED1Q96CU9 SNORD115-21-201ENST00000362963 81 ntBASIC2.04□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 347.7 ms